Gene Information

Name : MYA_0058 (MYA_0058)
Accession : YP_006331159.1
Strain :
Genome accession: NC_017920
Putative virulence/resistance : Virulence
Product : IpgF protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 69078 - 69524 bp
Length : 447 bp
Strand : +
Note : -

DNA sequence :
ATGAACAGACGGTTCGCTTCGATCGCGCTGATCGCCGCCGGCGCAGGGTTCGCCTGCGGCAACGCTCGCGCCGATTGTTT
CGACGAAGCCGCCCGGTATCAGAAGGTCAATCCGCTGATCCTGCGCGCGATCGCGTGGCAGGAGTCGCACAACCGGCCCG
ACGCGCTGAACAAGAATACGAACGGCTCCGTCGACTACGGGCTCATGCAGATCAACTCGATCCATCTGCAGACGCTGTCG
CGTTACGGCATCGGCCGCGACACGCTGATGGAGCCGTGCAAGAACGTCTACATCGCCGCGTGGCATCTGCGCCAGAAGAT
GAATCGCTACGGCAACAGCTGGCAGGCGGTGGGCGCCTATCATTCGGAAACGCCGTCGCTGCGCGACAAGTATGCGCGGC
AGATCGCCGGCATCCTGTCGCAGTGGAAGCTGCTGCCGCAGCAGTGA

Protein sequence :
MNRRFASIALIAAGAGFACGNARADCFDEAARYQKVNPLILRAIAWQESHNRPDALNKNTNGSVDYGLMQINSIHLQTLS
RYGIGRDTLMEPCKNVYIAAWHLRQKMNRYGNSWQAVGAYHSETPSLRDKYARQIAGILSQWKLLPQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 9e-37 69
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 1e-36 69
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 5e-36 67
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 1e-36 65
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 2e-36 64
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 2e-36 64
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 1e-16 41
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 1e-16 41
unnamed AAK26704.1 unknown Not tested LEE Protein 1e-16 41
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 1e-16 41
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 1e-16 41
unnamed AAL57531.1 unknown Not tested LEE Protein 1e-16 41
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 1e-14 41
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 1e-14 41
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 1e-14 41
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYA_0058 YP_006331159.1 IpgF protein VFG0994 Protein 3e-11 45
MYA_0058 YP_006331159.1 IpgF protein VFG0539 Protein 3e-15 41