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Name : MYA_0056 (MYA_0056) Accession : YP_006331157.1 Strain : Genome accession: NC_017920 Putative virulence/resistance : Virulence Product : General secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 64885 - 66384 bp Length : 1500 bp Strand : - Note : - DNA sequence : GTGAGCGACGTGCTCGCGTCCGCGCCCCAGGACGGCGCGCCGGGCGAACGGCAGCCGCCGTCGCCGCTCGCCGCCCGCCT GCTGCCGTACGGCTTCGCGAAGAGCGGCCAGGTGCTGATCGCGCACCAGCTCGACGATACGCTCGAGGTGTGGATCAGCG AACGCACGAGCGACGCGGCGCTCGCCGAGATCGCCCGCAACTTCGGTTCGATCGTCGTACAGCGCGTGCCGGCCGACGAG CTCGCGCAGGCGATCAACCACGCGTACGCGCGCCAGGACGGCAGCGCCGCGCAGATCGTCGGCGAGGTCGAAGGCGAAGT CGACCTGTCGCGGCTGATGCAGGACATCCCGGAAGTCGAGGATCTGCTCGAATCGGAAGACGACGCGCCGATCATCCGCA TGATCAACGCGCTGCTCACGCAGGCCGCGCGCGAGCAGGCGTCGGACATCCACATCGAGCCGTTCGAGAATGCGTCGGTC GTGCGGTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGCCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGAT CAAGATCATGGCGCAGCTCGACATCGCCGAAAAACGCCTGCCGCAGGACGGCCGCATCACGCTGCGCGTCGGCGGCCGCC CGGTGGACGTGCGCGTGTCGACGCTGCCGACCGGGCACGGCGAGCGCGCGGTGCTGCGTCTGCTCGAAAAGGACGCGCAG CGCCTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTCGTCCAGTTCGACAAGCTGATCGCCCGCCCGCACGGGAT CGTGCTGGTGACGGGGCCGACCGGCTCCGGCAAGACGACGACGCTGTACGCGTCAATGTCGCGGCTCGAAACGGCGACGA CCAACATCATGACGGTCGAGGATCCGATCGAATACGACCTGTCCGGCATCGGCCAGACGCAGGTCAACGAGCGGATCGGG ATGACGTTCGCCCGCGCGTTGCGCTCGATCCTGCGCCAGGATCCGGACGTCATCATGATCGGCGAAATCCGCGACCTCGA AACCGCGCAGATCGCGGTGCAGGCATCGCTCACGGGCCACCTGGTGCTGGCGACGCTGCATACGAACGACGCCGCGTCGG CCGTCACGCGGCTGACCGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGGCTG GTGCGCCAGCTGTGTCCGGTCTGCAAGGAAGAGCGGCACGAGGACGGCCGCAGCGTGTGGCATCCGGTCGGCTGCGACAA GTGCGGCCATTCGGGCTACACGGGCCGGCGCGGCGTGTACGAACTGCTGGTGGTCGACGATGCGATCCGCTCGCTGATCC ATCGCAACGCGGCCGACGCGGAGATCCTCGCCACCGGCCGCGCGCAAGGCATGCGCACGCTGCGCGACGATGCCGAGCGC TGGCTCGCGGCCGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCATAG Protein sequence : MSDVLASAPQDGAPGERQPPSPLAARLLPYGFAKSGQVLIAHQLDDTLEVWISERTSDAALAEIARNFGSIVVQRVPADE LAQAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASV VRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQ RLNLEALGMGRDTLVQFDKLIARPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIG MTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRL VRQLCPVCKEERHEDGRSVWHPVGCDKCGHSGYTGRRGVYELLVVDDAIRSLIHRNAADAEILATGRAQGMRTLRDDAER WLAAGATSLEEVLRVTGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-117 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-117 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MYA_0056 | YP_006331157.1 | General secretion pathway protein E | VFG0182 | Protein | 3e-125 | 56 |
| MYA_0056 | YP_006331157.1 | General secretion pathway protein E | VFG2048 | Protein | 3e-117 | 53 |
| MYA_0056 | YP_006331157.1 | General secretion pathway protein E | VFG1876 | Protein | 3e-119 | 52 |
| MYA_0056 | YP_006331157.1 | General secretion pathway protein E | VFG0233 | Protein | 1e-86 | 49 |
| MYA_0056 | YP_006331157.1 | General secretion pathway protein E | VFG2426 | Protein | 1e-76 | 48 |
| MYA_0056 | YP_006331157.1 | General secretion pathway protein E | VFG0112 | Protein | 1e-80 | 44 |
