Gene Information

Name : lolD1 (MUS_0691)
Accession : YP_006327484.1
Strain : Bacillus amyloliquefaciens Y2
Genome accession: NC_017912
Putative virulence/resistance : Resistance
Product : Lipoprotein-releasing system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 680580 - 681335 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence :
ATGGCTAATAAAGTATTGGAAGTTAAAAACTTATCCAAGGTCTACAAAGGGAGTGGTTATGAAGTAACTGCATTAGACAA
AGTTTCTTTTGAATTGAAGAATGGTGAACTGCTTGCAATTATGGGGACAAGCGGTTCAGGTAAAAGCACTCTTTTAAATA
TACTCGGTGCTCTTGATGAACCCTCAAGCGGTAAAGTTATTCTTGATGGTAAAGAAACAAATGACTTTTTTAAAGAACCT
AAAGCTACGATCTATAGAAGGGATAACATTGGTTTTATCTTTCAATCTTTTAATCTATTGAAGGATCTTACAGTTGAGGA
GAATATAGCTTTACCACTTGTATTAAAGGGAATAAATAAGAAGGATGCAGATAAAAAAGTAAAGGAAATGCTACAGCTTG
TAAGCCTTACAAAATGGAAAAGACATCGGCCTATTCAACTTTCAGGAGGTCAGCAGCAAAGAGTTGCGATTGCCAGAGCA
CTGATTACTTCGCCTCCTATTGTATTAGCAGATGAGCTTACAGGAAATTTGGATTTTAATACAACACAGGATATATTAAA
TGTGCTTGTAGATATGAAGAAACGTCTTAATAAGAGTATGATCATAGTTACTCATGATCCGAATGTCGCGTTATATTCTG
ACAGAGTTTTATTTTTTCATGATGGAAATATAGTTGATGAATATAAAAGTCTTGGACAAGGAGATCTGTCGAGTATCCTT
AATAAATTTCAAAAAATAATGGAGAGAGACCAATGA

Protein sequence :
MANKVLEVKNLSKVYKGSGYEVTALDKVSFELKNGELLAIMGTSGSGKSTLLNILGALDEPSSGKVILDGKETNDFFKEP
KATIYRRDNIGFIFQSFNLLKDLTVEENIALPLVLKGINKKDADKKVKEMLQLVSLTKWKRHRPIQLSGGQQQRVAIARA
LITSPPIVLADELTGNLDFNTTQDILNVLVDMKKRLNKSMIIVTHDPNVALYSDRVLFFHDGNIVDEYKSLGQGDLSSIL
NKFQKIMERDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD1 YP_006327484.1 Lipoprotein-releasing system ATP-binding protein CP001581.1.gene798.p Protein 6e-44 47
lolD1 YP_006327484.1 Lipoprotein-releasing system ATP-binding protein CP001581.1.gene598.p Protein 2e-37 46
lolD1 YP_006327484.1 Lipoprotein-releasing system ATP-binding protein NC_012469.1.7686878. Protein 3e-41 43
lolD1 YP_006327484.1 Lipoprotein-releasing system ATP-binding protein NC_008702.1.4606598. Protein 6e-35 43
lolD1 YP_006327484.1 Lipoprotein-releasing system ATP-binding protein NC_012469.1.7686946. Protein 3e-25 42