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Name : gbsA (MUS_3384) Accession : YP_006329988.1 Strain : Bacillus amyloliquefaciens Y2 Genome accession: NC_017912 Putative virulence/resistance : Virulence Product : glycine betaine aldehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.8 Position : 3211096 - 3212568 bp Length : 1473 bp Strand : - Note : - DNA sequence : ATGAGCAAAACGCTTTATATCGGCGGCGAATGGATCAGTGCAGAAAAAAAACAGACCCGCCGTATCATTAATCCATTTAA TCAAGAAGAAATTGCAACGGTATGCGAAGGAGACCGGGACGATGCGGTGAAAGCCATCGCCGCAGCCAGAAAAGCATTTG ATGAAGGGGAGTGGCCGGTGCTTTCCGGGCTCGAGCGCGGACAATTTGTTCTGAAAATTGCGGAATTAATCAGACGCGAT CTGAACGAATTAGCTGAGCTGGAATCGCTCGATACAGGAAAAACGATTGAAGAAAGTAAAGCCGATATGGATGATATCGC AAATGTATTTCAATATTATGCCGGTTTGGCGGATAAAGACGGAGGCGAGGTCATTTCATCTCCGATTCCTGATTCCGTAA GTAAAATCGTCAGAGAGCCCATTGGCGTATGCGGACAAATTACGCCGTGGAACTATCCGCTCCTTCAGGCGAGCTGGAAA ATCGCTCCCGCTCTTGCGGCCGGAAACACGATCGTTTTAAAGCCGAGCGAGATTACTCCGCTGACAACCATTAAAGTCTT TCAATTAATAGAAGAAGCCGGTATTCCGAAAGGGGTCGCCAATCTCGTGCTGGGGCCGGGCGCTTCTGTCGGCGATGAGC TGGCGAGAAACCTCGACGTCGATTTGGTCTCTTTTACGGGCGGAATTGAAACAGGCAAAAAAATCATGCAGGCGGCAAGC GGCAACGTGAAAAAGATTGCCCTGGAGCTTGGCGGCAAAAATCCGAATATCGTATTTCAAGATGCAGATCTCGAAACAGC TGCAGATCAAGCGCTGAACGCCGTGTTTTTCCATGCCGGCCAAGTTTGTTCGGCAGGGTCACGTCTTTTGGTGGACGAAG CCATTCATGATGAATTTTTAGCCGAGCTGATCAAGCGTACGAAACGCATCAAATTAGGAAACGGTTTTCATGAAGATACG GAAAGCGGTCCGCTGATTTCCGCCGAGCATCGGGCTAAAGTCGAAAAATACGTAGAAATCGGCATCGAAGAAGGGGCAAA ACTGGAAACAGGCGGCAAACGTCCTGATGATCCCGCCCTTCAAAACGGTTTCTTCTATGAACCTACTATTTTCTCAAACT GCAAGTCTGATATGCGGATAGTCCAAGAGGAGATCTTCGGCCCCGTTTTAACAGTTGAGTCATTTTCTTCTGAAGAAGAA GTGATCAGACTTGCCAACGATACCATTTACGGGCTGGCCGGAGCGGTATGGTCAAAGGATATTGAAAAATGCGAACGCGT AGCCGCCAAACTGCGGATGGGAACGGTATGGATCAATGATTTCCACCCGTATTTCGCGCAAGCGCCATGGGGCGGGTACA AACAATCGGGCTTCGGCCGCGAACTCGGCAAAATCGGCCTGGAAGAATACACGGAAATCAAACATATTTACCGCAACACG AAACCTGCGGCTGTGAACTGGTTTCAAGCATAA Protein sequence : MSKTLYIGGEWISAEKKQTRRIINPFNQEEIATVCEGDRDDAVKAIAAARKAFDEGEWPVLSGLERGQFVLKIAELIRRD LNELAELESLDTGKTIEESKADMDDIANVFQYYAGLADKDGGEVISSPIPDSVSKIVREPIGVCGQITPWNYPLLQASWK IAPALAAGNTIVLKPSEITPLTTIKVFQLIEEAGIPKGVANLVLGPGASVGDELARNLDVDLVSFTGGIETGKKIMQAAS GNVKKIALELGGKNPNIVFQDADLETAADQALNAVFFHAGQVCSAGSRLLVDEAIHDEFLAELIKRTKRIKLGNGFHEDT ESGPLISAEHRAKVEKYVEIGIEEGAKLETGGKRPDDPALQNGFFYEPTIFSNCKSDMRIVQEEIFGPVLTVESFSSEEE VIRLANDTIYGLAGAVWSKDIEKCERVAAKLRMGTVWINDFHPYFAQAPWGGYKQSGFGRELGKIGLEEYTEIKHIYRNT KPAAVNWFQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 5e-76 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-76 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-76 | 42 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-76 | 42 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-70 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-75 | 42 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 4e-70 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gbsA | YP_006329988.1 | glycine betaine aldehyde dehydrogenase | VFG0082 | Protein | 2e-76 | 42 |
