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Name : murD (PflA506_0928) Accession : YP_006322449.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase Function : - COG functional category : - COG ID : - EC number : 6.3.2.9 Position : 1049337 - 1050683 bp Length : 1347 bp Strand : + Note : identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087 DNA sequence : GTGTCCCTGATCGCTTCAGACCACTTCCGCATCGTTGTCGGCCTCGGCAAGAGCGGCATGTCCCTGGTTCGCTTCCTGGC GAACCGGGGCACGTCGTTTGCCGTGGCCGATACGCGGGAAAATCCACCGGAGCTGGTCACGCTGCGCCGTGACTACCCGC ACGTGGAAGTGCGCTGTGGCGAGCTGGATGTCGAGTTTCTGTGCCGTGCCGACGAGCTCTACGTGAGCCCGGGCCTGGCC CTGGCGACACCGGCCCTGCAAGCGGCTGCGGCCCGTGGTGTGAAGCTGTCTGGCGATATCGACCTGTTCGCACGCAACGC GAAGGCGCCGATCGTGGCCATCAGCGGTTCCAACGCCAAAAGCACCGTCACCACTCTGGTCGGCGAGATGGCGGCTGCGG CGGGCAAGCGTGTGGCCGTTGGCGGCAATCTTGGCGTGCCGGCACTGGATTTGCTCAGCGACGACGTCGAGTTGTACGTG ATGGAGTTGTCGAGCTTCCAGCTGGAAACCACCCACGACCTGGGCGCTGAAGTGGCGACGGTATTGAACGTCAGCGAAGA CCATATGGACCGCTACAGCGGCCTGCCGGCTTATCACTTGGCCAAGCACCGGATCTTCCGTGGCGCCAAGCAATTTGTCG TCAACCGCCAGGATGCCCTGAGCCGTCCGCTGATAGGCGAGGGCATGCCCTGCTGGACCTTCGGCCTGGGCAAACCGGAC TTCAAAGGCTTCGGCATTCGTGAAGAGAACGGCGAGAAGTACCTGGCGTTCGAATTCCAGAACCTGATGCCGGTACGCGA ACTGAAAATCCGTGGCGCACACAACCAGTCCAATGCCCTGGCGGCCTTGGCGCTCGGTCACGCGGTTGGCCTGCCGTTCG ACGCCATGCTCGCGAGCCTGCGCACCTTTGCCGGGCTTGAGCATCGCTGCCAGTGGGTGCGCGACCTCAATGACGTCAGC TATTACAACGACTCCAAAGCCACCAATGTCGGTGCAGCCCTGGCGGCCATCGAAGGCCTGGGGGCCGATATCGACGGCAA GCTGGTGCTGATCGCCGGTGGTGATGGCAAGGGTGCCGACTTCAAGGACCTCAAAACTCCAGTGGCCGCCCATTGCCGCG CCGTGGTGCTGATGGGCCGCGATTCGGACCTGATCGCCGCCGCCCTCGGTGACGCTGTACCGCAAGTACGCGCAGCTTCC CTGGACGACGCCATTGCCCAGTGCAAAGCCCTGGCCCAGCCTGGCGATGCGGTGTTGCTGTCGCCCGCGTGCGCCAGCTT CGACATGTTCAAGAACTATGAAGAGCGCGGCCAACTGTTCGCCCGCGCCGTGGAGGCTTTGGCATGA Protein sequence : MSLIASDHFRIVVGLGKSGMSLVRFLANRGTSFAVADTRENPPELVTLRRDYPHVEVRCGELDVEFLCRADELYVSPGLA LATPALQAAAARGVKLSGDIDLFARNAKAPIVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGVPALDLLSDDVELYV MELSSFQLETTHDLGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDALSRPLIGEGMPCWTFGLGKPD FKGFGIREENGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLASLRTFAGLEHRCQWVRDLNDVS YYNDSKATNVGAALAAIEGLGADIDGKLVLIAGGDGKGADFKDLKTPVAAHCRAVVLMGRDSDLIAAALGDAVPQVRAAS LDDAIAQCKALAQPGDAVLLSPACASFDMFKNYEERGQLFARAVEALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 5e-82 | 54 |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 5e-82 | 54 |
