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Name : kdsD (PflA506_0874) Accession : YP_006322397.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : - COG ID : - EC number : 5.3.1.13 Position : 998303 - 999277 bp Length : 975 bp Strand : - Note : identified by similarity to SP:P45395; match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGAGCCAATCCAGCGACCTTATTCAATCCGCACAACGCACCATACGCCTTGAGCTTGAAGCCGTAGAAGGCTTGCTGGC CCATATCGACGCGGATTTCGTGCGCGCCTGCGAGATGATTCTGGCGAGCAAGGGCCGCGTTGTGGTGGTCGGCATGGGCA AGTCCGGCCACATTGGCAACAAGATCGCGGCGACCTTGGCGAGCACGGGGACCACTGCGTTTTTCGTGCACCCGGCCGAA GCCAGCCACGGCGACATGGGCATGATCACCAAGGATGACGTGATTTTGGCGCTGTCCAACTCCGGCACCACCAACGAAAT CGTGACCCTGTTGCCGCTGATCAAGCGCCTGGGCATCCAGATGATCAGCCTCACAGGTAACCCTGAGTCAACGTTGGCCA AGGCTGCCGACGTCAACCTGAACGTGCACGTGACCCACGAAGCCTGCCCACTGAATCTGGCGCCCACCTCCTCCACCACC GCCGCGCTGGTAATGGGCGATGCCCTGGCGGTGGCATTGCTGGAGGCCCGCGGGTTTACGGCCGAGGACTTCGCATTTTC ACATCCGGGTGGCGCACTGGGCCGTCGCCTGCTGCTGAAAGTGGAAAATGTCATGCATCGCGGCGCCGAGCTGCCGAGCG TTCCACGCGGCACTCTGCTTCGGGATGCGCTGATGGAAATGACCCGCAAGGGCTTGGGCATGACCGCCATCGTCGAAACC GATGGCCGGCTGGCCGGGATATTCACCGACGGCGACCTGCGTCGCACCCTCGACCGCACCATTGATATCCATACCGCGAC CATCGACGCCGTGATGACCCCTCACGGCAAGACCGCCCGCGCCGAAATGCTCGCGGCTGAAGCGTTGAAAATCATGGAAG ACCACCGGATAGGTGCACTGATCGTGGTCGACCACGATGATCGGCCGATCGGGGCCCTAAACCTAGGCGACTTGCTGCGC GCAGGAGTGATGTAA Protein sequence : MSQSSDLIQSAQRTIRLELEAVEGLLAHIDADFVRACEMILASKGRVVVVGMGKSGHIGNKIAATLASTGTTAFFVHPAE ASHGDMGMITKDDVILALSNSGTTNEIVTLLPLIKRLGIQMISLTGNPESTLAKAADVNLNVHVTHEACPLNLAPTSSTT AALVMGDALAVALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHRGAELPSVPRGTLLRDALMEMTRKGLGMTAIVET DGRLAGIFTDGDLRRTLDRTIDIHTATIDAVMTPHGKTARAEMLAAEALKIMEDHRIGALIVVDHDDRPIGALNLGDLLR AGVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-57 | 44 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-57 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 6e-57 | 43 |
