Gene Information

Name : PflA506_0740 (PflA506_0740)
Accession : YP_006322268.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 850387 - 851346 bp
Length : 960 bp
Strand : -
Note : identified by match to protein family HMM PF04463; match to protein family HMM PF08349

DNA sequence :
ATGTCCAGCCATGTGAAACCGAAGATCGCCATCAGCGCCTGCCTTCTGGGTGAGAACGTGCGCTTCAATGGCGGTCATAA
ACAGTCCCTGCTATGCAGCCAGACCCTGAGTGACTACTTCGATTTTGTCCCGTTGTGCCCTGAAGTTGCCATCGGCCTGG
GCATTCCTCGGCAAGCGATCCGCCTGGTCGGCGATCCCAACCAACCGCAGGCTGTGGGCAGCGTAAACCCTGCGCTCAAT
GTCACTCAGCCACTGGACGATTACGGCCAGCAAATGGCCCGGGAACATACCGACCTGTGCGGCTACATTTTCATGCAAAA
GTCACCGTCTTGTGGGCTGGAGCGGGTCAAGGTGTACCGCGACAACGGCACGCCCGTCGACGGTGGCGGGCGCGGTATTT
ACGCCCAGGCGTTTTGTGCCCGCCACCCCAACCTGCCGGTGGAAGAGGACGGTCGCCTGAACGACCCGGTGCTTCGAGAA
AACTTCCTCACTCGCGTATTCGTGTACGCCAGTTGGCAGCAACTGTTGGCCGACGGCCTTACCCGTCACCGCTTGCTGAC
GTTTCACTCGCGCTACAAGTACCTGCTGATGGCCCACAGCCCGGCGCATTACAAAAGCCTGGGCCACTTGCTCGGCAGCA
TGGGCAAGGGCATTGACCTGCAAGCTCTGGCCGACGGCTATTTCAGCGAACTGATGGCGGGCCTGAAAAAATGCGCAACT
CGCGGTACCCATACCAATGTGCTGCAACACATCAGTGGCTACCTCAAGCAGGCCATCAGCGCCGATGACAAACAGGAAAT
GCAGACCGTCATCGGCCAATACCGCCACGGCATCGTGCCACTGGTGGTGCCGCTGACCCTGCTCAAACACCACTTTCGCC
AACATCCGGACCGCTACATCGCGCAGCAGGCCTACCTGCAACCGCACCCGGAAAACCTCAGCCTGCGTAATGCGATCTAA

Protein sequence :
MSSHVKPKIAISACLLGENVRFNGGHKQSLLCSQTLSDYFDFVPLCPEVAIGLGIPRQAIRLVGDPNQPQAVGSVNPALN
VTQPLDDYGQQMAREHTDLCGYIFMQKSPSCGLERVKVYRDNGTPVDGGGRGIYAQAFCARHPNLPVEEDGRLNDPVLRE
NFLTRVFVYASWQQLLADGLTRHRLLTFHSRYKYLLMAHSPAHYKSLGHLLGSMGKGIDLQALADGYFSELMAGLKKCAT
RGTHTNVLQHISGYLKQAISADDKQEMQTVIGQYRHGIVPLVVPLTLLKHHFRQHPDRYIAQQAYLQPHPENLSLRNAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 7e-63 44
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 7e-63 44
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 6e-63 44
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 3e-63 44
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 5e-63 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PflA506_0740 YP_006322268.1 hypothetical protein VFG0490 Protein 3e-63 44