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Name : rscJ (PflA506_0713) Accession : YP_006322242.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : type III secretion apparatus lipoprotein RscJ Function : - COG functional category : - COG ID : - EC number : - Position : 827006 - 827806 bp Length : 801 bp Strand : - Note : identified by match to protein family HMM PF01514; match to protein family HMM TIGR02544 DNA sequence : ATGAATAACTCTCTGCGTGTCGTTTTAGTTTTGATCATGGCTTTTATACTGAGCGGATGCGGTGACCGAGTGGAACTTCA TCGCCAATTGTCCGAGCAAGAAGCCAATGAGGTCGTCGCCGAATTGGCTGATAAACATATTCGTGCGCAAAAGACCCCGG CCAAAGATGGCGTCGTCGTAACGGTCAATACAAACGACATCGGGCGCGCCGTACGTACCTTGGAAGCCGCCGGCCTTCCT CGACTTGCCCGGACCACCATGGGGGATACATTTCGCAAGGAAGGGGTCATTTCCACCCCCCTGGAAGAGCGTGCCCGCTA CATCTATGCCTTATCCCAAGAGCTTGAAACCACCTTGTCCAAGATCGATGGCGTTATTGTCGCACGCGTGCATGTGGTGT TGCCCGAGCGCATTGCGCCAGGAGAGCCGGTCCAACCTGCATCTGCCTCCGTGTTTATCAAGCATGATCCACGCCTGGAT CCCGACAACATCCGTGCGCGGGTCCGCAGAATGGTGGCAAGCAGTATTCCCGGGATGACCACAGCGGTGGATAACCCGCA AAAACTCACTGTGGTGTTTGTACCTGCCTCCACTTATCAGGAACAGCAACGCCTGGTGTATTTCGGCCCCTTCCTGGTGC CTGGCGACGATCTCGGCTTCTGGCGAACCAGCATAATGATTGTGCTGCTCGCTCTGGTTTCGGCCGTGGCCGCCATGATC TTCCTCCAAGCGCGGCGCAAGCGTCACTCCCAGGAGCCGGCCATTAAAGGCGACTCAGCGGGGTCAACGCATGGCACCTA G Protein sequence : MNNSLRVVLVLIMAFILSGCGDRVELHRQLSEQEANEVVAELADKHIRAQKTPAKDGVVVTVNTNDIGRAVRTLEAAGLP RLARTTMGDTFRKEGVISTPLEERARYIYALSQELETTLSKIDGVIVARVHVVLPERIAPGEPVQPASASVFIKHDPRLD PDNIRARVRRMVASSIPGMTTAVDNPQKLTVVFVPASTYQEQQRLVYFGPFLVPGDDLGFWRTSIMIVLLALVSAVAAMI FLQARRKRHSQEPAIKGDSAGSTHGT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcJ | AAT96359.1 | HrcJ | Virulence | S-PAI | Protein | 3e-60 | 69 |
| hrcJ | AAT96279.1 | HrcJ | Virulence | S-PAI | Protein | 3e-60 | 69 |
| hrcJ | AAT96320.1 | HrcJ | Virulence | S-PAI | Protein | 3e-60 | 69 |
| hrcJ | ABA47308.1 | HrcJ | Virulence | S-PAI | Protein | 1e-60 | 69 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 7e-64 | 67 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 7e-64 | 67 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 8e-64 | 67 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 6e-64 | 67 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 4e-65 | 66 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 6e-68 | 65 |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 4e-60 | 65 |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 9e-28 | 42 |
