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Name : tssF1 (PflA506_5305) Accession : YP_006326691.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : type VI secretion protein TssF1 Function : - COG functional category : - COG ID : - EC number : - Position : 5806928 - 5808787 bp Length : 1860 bp Strand : + Note : identified by similarity to GB:AAG03478.1; match to protein family HMM PF05947; match to protein family HMM TIGR03359 DNA sequence : ATGAACCCGCGCCTGCTGGAGCTGTACAACCAGGAACTGCACCACGTGCGCGAAAGCGCCGCCGAGTTCGCCAAGGAATA CCCGAAGATCGCCAGTCGGCTGACCCTGTCCGGCATGGACTGCGCCGACCCGTACGTCGAACGTTTGCTTGAAGGCTTCG CCTATCTCACCGCCCGCGTGCAGCTCAAGCTCGACGCCGAGTACCCGACCTTCACCCACAACTTGCTGGAAATCGCCTAC CCGCACTACCTGGCACCGACGCCGTCGATGACCGTAGTGCAATTGCAGACCGACCCCGATGAAGGCTCCCTGGCCGGCGG TTTCCCGCTGCCCCGGGACACGGTGCTGCGTGCCGCCCTGGGCCGTGAAACCCAGACCTGCTGCGAGTACCGCACCGCGC ACCCGGTGACGCTGTGGCCGTTGCAGGTCAGCAACGCCGAATATTTCGGCAACCCCGCCGCCGTGCTCGGACGCCTGGCC GCCAGCGAACCGAAAGCCAAGGCCGGCCTGCGCCTGACCCTGCGCACCGGTGCCGAGCTGCCGTTCAACAGCCTCGACCT GGATACCTTGCCGCTGTACCTGAGCGGCGCTGATGAACAACCGTTTCGCCTCTACGAACAACTGCTGGGCAATGCCTGCG CGGTGTTTGCGCGCCAGCCCGGTGGCGATTGGGTCGAGCGCCTGCCCCAGGGCGCGTTGCGCTCGCAGGGGTTCGATGAT GCCGATGCGGCCATGCCGGTGGTGGCGCGGGCGTTCCAGGGCTATCGCCTGTTGCAGGAGTACTTCGCCCTGCCCCATCG CTTCCTGTTCGTTGAGTTCGCCGAGTTGAGACGCGCGGTCAAGCGGTGTGACGGCCAGGAGCTGGAACTGATCGTGTTGT TCGACCGCCACGAACCGAGCCTGGAAGGCAGTGTCGGCGCGGCGCAGTTCTTGCCGTTCTGCACGCCCGCCATCAACCTG TTCCCCAAGCGCGTGGACCGCATCCACTTGTCCGACCGGGTCAATGAACACCATGTGATCGCCGACCGTACGCGGCCGAT GGATTTCGAGATTCACTCCTTGAGCGGCATTACCGGCCATGGCACCGGACCGGAGCAGCCGTTCTTGCCGTTCTATGCGG TGCGCGATCCGTCGCGCTATGGCCGCGACCAGGCGTATTACAGCGTGCGCCGCGAGCCACGGGTGCTGTCCAGCGACCAA CGCCGCAATGGCCCACGCTCCACTTATGTGGGCAGTGAAACCTTCGTCAGCCTGGTGGACAGCCGCCAGGCGCCGTATCG CCATGACCTGCGCCAACTGGGCGTGACGGCGCTGTGCACCAACCGGGACCTGCCGCTGTTCATGAGCGTGGGCAACGGCA AGACCGACTTCACCCTGGCCGACAGCGCGCCGGTACTGGCCGTGCGATGCGTCGCCGGGCCAAGCCGCCCGCGTGCCAGC CACGCACATGACGCCAAGGCCTGGCGCCTGATCAGCCAGTTGTCGCTCAACTACCTCTCCTTGAGCGAACAGGGCCAGGG CGCCGGCGCCTTGCGCGAATTGCTGCGCCTGTACGGCGACAGCAATGACGCCGCCCTGCAATTGCAGATCGAAGGCCTGC GCGAAGTCAGCAGCAAGGCGGTGACCCGACGCCTGCCGATGCCTGGCCCGATTGTGTTTGGCCGCGGCCTGGAAATCACC CTGGAGTTCGATGAAAACGCGTTTCGCGGCACCGGCGTGTTCCTGCTCGGTGCAGTGCTGGAGCGCTTCCTGGCACGCTA CGTGTCGATCAACAGCTTTACCGAGACGGTGATCCGTACCACCGAACGCGGCGAGATCATGCGATGGAAAGCCAAGCCCG GACGGCGTCCGACCCTGTGA Protein sequence : MNPRLLELYNQELHHVRESAAEFAKEYPKIASRLTLSGMDCADPYVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAY PHYLAPTPSMTVVQLQTDPDEGSLAGGFPLPRDTVLRAALGRETQTCCEYRTAHPVTLWPLQVSNAEYFGNPAAVLGRLA ASEPKAKAGLRLTLRTGAELPFNSLDLDTLPLYLSGADEQPFRLYEQLLGNACAVFARQPGGDWVERLPQGALRSQGFDD ADAAMPVVARAFQGYRLLQEYFALPHRFLFVEFAELRRAVKRCDGQELELIVLFDRHEPSLEGSVGAAQFLPFCTPAINL FPKRVDRIHLSDRVNEHHVIADRTRPMDFEIHSLSGITGHGTGPEQPFLPFYAVRDPSRYGRDQAYYSVRREPRVLSSDQ RRNGPRSTYVGSETFVSLVDSRQAPYRHDLRQLGVTALCTNRDLPLFMSVGNGKTDFTLADSAPVLAVRCVAGPSRPRAS HAHDAKAWRLISQLSLNYLSLSEQGQGAGALRELLRLYGDSNDAALQLQIEGLREVSSKAVTRRLPMPGPIVFGRGLEIT LEFDENAFRGTGVFLLGAVLERFLARYVSINSFTETVIRTTERGEIMRWKAKPGRRPTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0289 | NP_454871.1 | hypothetical protein | Not tested | SPI-6 | Protein | 4e-118 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssF1 | YP_006326691.1 | type VI secretion protein TssF1 | VFG2074 | Protein | 0.0 | 81 |
