|
Name : tssB1 (PflA506_5301) Accession : YP_006326687.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : type VI secretion protein TssB1 Function : - COG functional category : - COG ID : - EC number : - Position : 5803694 - 5804200 bp Length : 507 bp Strand : + Note : identified by similarity to GB:AAG03473.1; match to protein family HMM PF05591; match to protein family HMM TIGR03358 DNA sequence : GTGGCGAAGCAAAGTTCTCAGAAATTCATCGCGCGCAACCGTGCGCCTCGAGTGCAGATCGAGTACGACGTCGAGCTTTA CGGCGCCGAGAAAAAGGTCCAGCTGCCCTTCGTGATGGGCGTGATGGCCGACCTCGCCGGCAAGCCTGCCGAGCCGCTGG CCCCCGTGGCCGACCGCAAGTTCCTTGAGGTGGACGTCGACAACTTCGACTCACGCCTCAAGGCCATGCAGCCACGCGTC GCGTTCCACGTACCCAATGAGCTGACAGGCGAAGGCAACCTGAGCCTGGACATCACCTTCGAAAGCATGGACGACTTCAG CCCGGCCGCCGTGGCCCGCAAGGTCGACTCCCTGAATCAGCTGCTCGAAGCCCGCACCCAATTGGCCAACCTGCTGACCT ACATGGACGGCAAGACTGGCGCTGAAGAAATCATCATGAAGGCGATCAAGGACCCGGCATTGCTTCAGGCACTTGCCAGC GCGCCCAAGCCTGCAGGGGAGCAGTAA Protein sequence : MAKQSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPLAPVADRKFLEVDVDNFDSRLKAMQPRV AFHVPNELTGEGNLSLDITFESMDDFSPAAVARKVDSLNQLLEARTQLANLLTYMDGKTGAEEIIMKAIKDPALLQALAS APKPAGEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0297 | NP_454879.1 | conserved hypothetical protein | Not tested | SPI-6 | Protein | 9e-59 | 72 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssB1 | YP_006326687.1 | type VI secretion protein TssB1 | VFG2069 | Protein | 2e-68 | 91 |
