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Name : tssK1 (PflA506_5297) Accession : YP_006326683.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : type VI secretion protein TssK1 Function : - COG functional category : - COG ID : - EC number : - Position : 5798978 - 5800312 bp Length : 1335 bp Strand : - Note : identified by similarity to GB:AAG03469.1; match to protein family HMM PF05936; match to protein family HMM TIGR03353 DNA sequence : ATGTCCTGGAACAATCGCGTGGTCTGGTCGGAAGGCATGTTCATCGGAACGCAGCACTTCCAGCAGCATGACCGTTACCT GGAAAACCTGATCGATGCCCGCAGCCGTCCGTTGTCAGCGGGTGCCTGGGGGTTCTCCGAACTGCTGATCGACCAGGGCC TGCTGGCCCAGGGCAAGCTGGCGATTGTGTCGGCCCGCGGCCTGCTGCCCGATGGCACGCCGTTCAATATTCCCCAGGAC GACCTGGCGCCGAGCCCGTTGAACATCGACGACAACCTGCGCGACGGCCTGGTGTACCTGGCCCTGCCGCTCAAGCGCGC CGGCGCCCGTGACACGGTGGACGAGGGTGAAGCCCTGGAAGCCGCGCGCTACGTGAGCCAGGTGCGTGAAGTGCGCGACG ACAACGCCCCGTTCGAAAACCGTGCACCGGTGGCGGTGGGCTCGCGGGCATTGCGCCTGCTGACGGCGCAGGACGGCATC AGCGACTACGCCGCCATCGGCCTGGTACGCATCAAGGAAAAGCGTGCCGACCGTGCGTTGGTGCTCGATGACACTTACAT CCCGCCCGTGCTGGACGTGGCCGCAAGCAAGCCGCTGACGGCCTTTCGCAGCGAACTGCTGGGCCTGTTGCACCAGCGTG GCGAAGCCCTGGCCGGCCGCGTTGTGGCCTCGGGTGCCGGGGGGGCCTCTGAGATCGCCGACTTCATGCTGTTGCAACTG GTCAACCGCGCCCAGCCGCTGATCCAGCACTTCAGCCAGTTGAGCCCGTTGCACCCGGAGCGCTTCTTCAGCGAACTGGT CAGCCTGGCCGGTGAGTTTTCCACCTTCTCAACCTCCAGCCGTCGCCCCCAGGAATACCCGCAGTACCAGCACGACGACC TGGCCCTGAGCTTCATGCCGGTGATGGCGGCCCTGCGTGAAGCGCTGTCGATGCTCATCGACAGCAAGGCCACGCCGATC CCCATTGTGGAGAAAGCCTACGGCATCCATGTGGCGATGTTGGCCGACAAGACCCTGCTCGACAACGCCAGTTTCATCCT CGTGGTACGCGCCGATGTGCCCGGCGAAACCCTGCGTGCGCGTTTCGGCCAGCAGAGCAAGGTCGGCTCGGTGGAGCACA TCCGCGACATGGTCAACCTGCAACTGCCGGGCATCGGCCTGCTGCCGTTGCCGGTGGCGCCACGCCAGTTGCCTTACCAC GCTGGCAGCACCTACTACGAGCTGGACCGTGGCAGCGAGCACTGGCAGCAGCTGAATAATTCCGGCGGTTTCGCCTTCCA TATCGCCGGGCAGTTCCCGGGCTTGAACCTGGCCTTCTGGGCGATCCGAGGATAA Protein sequence : MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKLAIVSARGLLPDGTPFNIPQD DLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVDEGEALEAARYVSQVREVRDDNAPFENRAPVAVGSRALRLLTAQDGI SDYAAIGLVRIKEKRADRALVLDDTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL VNRAQPLIQHFSQLSPLHPERFFSELVSLAGEFSTFSTSSRRPQEYPQYQHDDLALSFMPVMAALREALSMLIDSKATPI PIVEKAYGIHVAMLADKTLLDNASFILVVRADVPGETLRARFGQQSKVGSVEHIRDMVNLQLPGIGLLPLPVAPRQLPYH AGSTYYELDRGSEHWQQLNNSGGFAFHIAGQFPGLNLAFWAIRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec25 | YP_851420.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 5e-71 | 42 |
| aec25 | AAQ96719.1 | Aec25 | Not tested | AGI-1 | Protein | 3e-71 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssK1 | YP_006326683.1 | type VI secretion protein TssK1 | VFG2065 | Protein | 3e-159 | 76 |
| tssK1 | YP_006326683.1 | type VI secretion protein TssK1 | VFG2082 | Protein | 3e-86 | 44 |
