Gene Information

Name : algR (PflA506_5220)
Accession : YP_006326606.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator AlgR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5717202 - 5717948 bp
Length : 747 bp
Strand : -
Note : identified by similarity to GB:AAD31823.1; match to protein family HMM PF00072; match to protein family HMM PF04397

DNA sequence : 
ATGAATGTCCTGATCGTTGATGACGAACCCCAAGCCCGCGAGCGACTGAGCCGTCTGGTCAGTGAACTCGAGGGTTATAC
AGTCCTTGAACCGAGCGCCACCAGCGGCGAAGAGGCGTTGACGCTGATCGACAGCCACAAGCCGGATGTAGTGCTGCTCG
ATATCCGCATGCCGGGCTTTGATGGCCTGCAGGTCGCCGCCCGCTTGAGCGAACGCGAATCGCCGCCCGCCGTGGTGTTG
TGTGCGGCGCAGGATGAGTTTTCTGCACAAGCGCTGGAAGACAGCGGTGTCAGTTTTCTCGTCAAGCCGGCCACTGCCGA
AGCCTTGCTCAAAGCCTTGAAAAAAGCCGAGCGTCCCAGCCGCGCCCAACTGGCTGCCTTGACGCAACCGGCTGCGCAAA
GTGGTAACGGGCCACGCAGCCATATCAGCGCACGTACCCGCAAGGGCATCGAGCTGATCCCACTCGGCCAGGTGGTTTAC
TTTATTGCCGATCACAAATACGTGACCTTGCGCCACGAGACCGGTGAAGTGTTGCTTGATGAACCGCTCAAGGCGCTTGA
AGACGAGTTTGGCGAGCGTTTCGTGCGCATTCATCGCAACGCGCTGGTCGCCCGTGAACGCATCGAGCGCCTGCAGCGCA
CGCCCCTGGGGCACTTTCAGCTATTCCTGAAGGGGCTCAATGGCGATGCGTTGATCGTCAGCCGACGCCATGTCGCTGGC
GTGCGCAAGATGATGCAGCAGCTTTAG

Protein sequence : 
MNVLIVDDEPQARERLSRLVSELEGYTVLEPSATSGEEALTLIDSHKPDVVLLDIRMPGFDGLQVAARLSERESPPAVVL
CAAQDEFSAQALEDSGVSFLVKPATAEALLKALKKAERPSRAQLAALTQPAAQSGNGPRSHISARTRKGIELIPLGQVVY
FIADHKYVTLRHETGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLFLKGLNGDALIVSRRHVAG
VRKMMQQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 1e-41 45
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 1e-41 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_006326606.1 DNA-binding response regulator AlgR VFG0119 Protein 8e-89 80