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Name : PflA506_5159 (PflA506_5159) Accession : YP_006326546.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : Type II/IV secretion system protein Function : - COG functional category : - COG ID : - EC number : - Position : 5654732 - 5656426 bp Length : 1695 bp Strand : + Note : identified by match to protein family HMM PF00437; match to protein family HMM PF05157 DNA sequence : ATGCCCGTCGCCGCTCACGATCACCTCTTGGAACTGCAGCAATTGTTGCCGGCGCTGGTCGAGCAAGGGTTGATCACGGC GCAGGCGGCGCAAAAGGTAGCGCCAGCGTCCGGCAGCCAGCATCCCTTGGAATGCATCGCAGCCCAGGGCCTTTGTCTGG AGACCTTGATTCAATGGCTGGCCCGGCAGGTCGGCCAGCCTTACCTGCGCATCGACCCATTGAAGATTGATGTGGCGGCC GTGGTGCCCTTGATGTCCCACGCCTTTGCTCAGCGCCACGGCATTCTTGCAGTCGCGGTGGATGCCCACAGCGTGACGGT CGCCAGTGCCCAACCCCATATCACCACTTGGGAAGCCGGGCTGTCCCAGGTACTCAAACGCACGATCAAGCGCGTGGTTG CCAACCCTCAGGATATTCAGCGCTGTATCAACGAGTTTTACCGCTTGGCCAAGTCCGTCAGCGGTGCGGATCAAAAAATG ACGGCGCCTGGCAATGTCGACTTGCTCAGCCTCGGCGCCAGCGACAAGGAGCCGGACGCCAACGACGCGCATATCGTCAA CATCGTCGACTGGCTGCTGCAATACGCCTTTGGCCAACGAGCCAGCGACATCCATATCGAGCCCTGCCGCGACCAGGGTC GGGTGCGCTTTCGCATTGATGGGCTGCTGCATGACGTCTATCAATTTCCCCCGCAGGTCACCATGGCCGTGGTCAGCCGC CTGAAAAGCCTGGGGCGAATGAACGTGGCCGAAAAACGCAAGCCCCAGGATGGCCGCGTCAAGACCAGGAACCCTGCGGG TGTCGAAGTGGAATTGCGGCTTTCCACCCTCCCCACGGCATTCGGCGAAAAACTGGTGATGCGAATTTTCGACCCACAGG TGCTGCTCAAGGATTTCGACCAGTTGGGTTTGTCCAGCGCCGACCAGCAACGCTGGCACGCCATGACGCGACGCACCCAC GGCATCATCCTCGTCACAGGCCCGACCGGCTCAGGCAAGACCAGCACCCTCTACACCACCCTCAGGCAACTGGCGACCCG CGAGGTCAACCTGTGCACGGTGGAAGACCCGATTGAAATGGTCGAGCCGGCCTTCAACCAGATGCAGGTCCAGCACAACA TCGACCTCACGTTCGCCAGCGGCATCCGCGCCCTGCTGCGCCAAGACCCGGACATCATCATGATCGGCGAAATCCGCGAC CAGGAAACCGCAGAGATGGCTATCCAGGCCGCGCTGACCGGGCACCTGGTGCTCTCGACCCTGCACACCAACGATGCACC CAGTGCCATCAGCCGCCTGCAGGAACTGGGCGTTGCTCACTATTTGATCAAAGCCACGCTCATAGGTGTGATGGCGCAGC GCCTGGTGCGGCTTCTGTGCAGCCACTGCAAGCACCCCGCGGGCCTGGAGGACGATGGCGGCTACGAAGCTGTCGGCTGT GCACACTGCCGTGACAGCGGTTATCGAGGCCGGGCCGGACTGTATGAAATCATGCTCATGGGCCCGGCACTCCAGGCGCT GGTCACTCCAGGCGCGGACGTACAAGCCCTGCGCCGTGGGGCACTGGCGCAGGGCATGAGCAGCCTGCGCATGGCCGGCA TCGAGAAAGTGAAGGCCGGGCTGACCACGATGACGGAGGTGTTGCGGGTCACGCCAGGGGATTCAGAAACAAATCCTTTG TTTGTTGGGCCATGA Protein sequence : MPVAAHDHLLELQQLLPALVEQGLITAQAAQKVAPASGSQHPLECIAAQGLCLETLIQWLARQVGQPYLRIDPLKIDVAA VVPLMSHAFAQRHGILAVAVDAHSVTVASAQPHITTWEAGLSQVLKRTIKRVVANPQDIQRCINEFYRLAKSVSGADQKM TAPGNVDLLSLGASDKEPDANDAHIVNIVDWLLQYAFGQRASDIHIEPCRDQGRVRFRIDGLLHDVYQFPPQVTMAVVSR LKSLGRMNVAEKRKPQDGRVKTRNPAGVEVELRLSTLPTAFGEKLVMRIFDPQVLLKDFDQLGLSSADQQRWHAMTRRTH GIILVTGPTGSGKTSTLYTTLRQLATREVNLCTVEDPIEMVEPAFNQMQVQHNIDLTFASGIRALLRQDPDIIMIGEIRD QETAEMAIQAALTGHLVLSTLHTNDAPSAISRLQELGVAHYLIKATLIGVMAQRLVRLLCSHCKHPAGLEDDGGYEAVGC AHCRDSGYRGRAGLYEIMLMGPALQALVTPGADVQALRRGALAQGMSSLRMAGIEKVKAGLTTMTEVLRVTPGDSETNPL FVGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-73 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-73 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PflA506_5159 | YP_006326546.1 | Type II/IV secretion system protein | VFG0182 | Protein | 3e-77 | 45 |
| PflA506_5159 | YP_006326546.1 | Type II/IV secretion system protein | VFG2048 | Protein | 1e-73 | 42 |
| PflA506_5159 | YP_006326546.1 | Type II/IV secretion system protein | VFG0112 | Protein | 7e-75 | 41 |
