Gene Information

Name : cadR (PflA506_5107)
Accession : YP_006326495.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Resistance
Product : Cd(II)/Pb(II)-responsive transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5602112 - 5602552 bp
Length : 441 bp
Strand : +
Note : identified by match to protein family HMM PF00376; match to protein family HMM PF09278; match to protein family HMM TIGR02047

DNA sequence : 
ATGAAGATCGGCGAACTGGCCAAACTCACCGATTGCCCGGTGGAAACCATCCGTTATTACGAGAAGGAAAACCTGCTGCC
GCCCCCGGCACGCACCGACGGCAACTACCGCGTGTACACCCAGGCGCACACCGAGCGGCTGACCTTTATTCGCAACTGCC
GCAGCCTGGACATGACCCTCGAAGAAATCCGCAGCCTGCTGGGTCTGCGCGACAGTCCCCAGGACCAATGCGAAAGCGTG
AATGCCTTGATCGACGAGCATATCCACCATGTGAAAGCGCGGATCGACGGGTTGTTGGCCTTGCAGGAACAACTGCTGGA
CCTGCGCCAACGTTGCGGCGGTGGGAACCAGTGCGGGATCTTGCAGCAGTTGGAAGTCAGCGGCGGGATTGCGGCCAGCG
AGGCCGAGCCTTCGCATGTGGGCAGAAGCCACGGCCATTAA

Protein sequence : 
MKIGELAKLTDCPVETIRYYEKENLLPPPARTDGNYRVYTQAHTERLTFIRNCRSLDMTLEEIRSLLGLRDSPQDQCESV
NALIDEHIHHVKARIDGLLALQEQLLDLRQRCGGGNQCGILQQLEVSGGIAASEAEPSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-28 52
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 3e-26 50
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 4e-26 50
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 4e-26 50
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-26 50
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 2e-26 50
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 2e-26 50
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-26 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadR YP_006326495.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0058 Protein 6e-47 77
cadR YP_006326495.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0301 Protein 2e-31 61