|
Name : cadA_1 (PflA506_5106) Accession : YP_006326494.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Resistance Product : cadmium-translocating P-type ATPase Function : - COG functional category : - COG ID : - EC number : 3.6.3.3 Position : 5599726 - 5602026 bp Length : 2301 bp Strand : - Note : identified by similarity to GB:AAK48831.1; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525 DNA sequence : ATGAGCCACTCCATTCATACCCCGCACAAGCACGACCACAAGCATGATCACGATCACGATCACGATCACGATCACGGTCA TGATCACAAACATGACCATGGGCCCGCCAAACTCACGCCTGTGGATAACCACGGCCATTCCGGCTCCTGCTGCTCCGGCG CTGCCGGGCCTGCCATCGTGACCCTGAGCGAGGCGCCCACCGCCGGCTCGCGCCTGAGCACCTTCCGCATCGAAGCCATG GACTGCCCTACCGAGCAGACGCTGATCCAGAACAAGCTGGGCAAGCTCGCTGGCGTGCAGCAACTGGAATTCAACCTGAT CAACCGCATCCTCGGCGTCACCCATGACCTGCCGAACACCGCGCCGATCATTGAGGCAATCAAGTCCATCGGCATGCAGG CCGACCCTATCGAAGAAGGCAGCCCTGCCGCCGCGCCGCCCGCCAAGAAACATTGGTGGCCGCTGGCGGTGTCGGGCGTG GGTGCCCTGGGGGCCGAGGTGCTGCACTTCACTGGTGTGGCGCCCACCTGGGTAATCGCGCTGGTGGCGTTGGTGTCGAT TCTCAGCGGCGGCCTTACCACCTACAAGAAGGGCTGGATTGCCCTGAAGAACTTCAACCTCAATATCAATGCCTTGATGA GCATCGCGGTGACGGGCGCGATCCTGATTGGCCAGTGGCCCGAAGCGGCGATGGTGATGTTCCTGTTCACCGTGGCCGAG TTGATCGAGGCCAAGTCCCTGGACCGTGCGCGCAACGCCATCAGCGGCCTGATGCAGATGACTCCGGAACAGGCCACGGT GCGCCAGGCTGACGGTTCCTGGCTGGAACAAGAGGTCAAGAGCATTGATCTTGGGGCGATTGTGCGGGTAAAGCCTGGCG AGCGCATCGGGCTCGACGGGGAAGTCACGGCCGGCCAGTCCACCATCGACCAGGCACCGATCACCGGGGAAAGCCTGCCG ATAGAAAAAACCGTGGGCGATAAAGTGTTTGCCGGCACCATCAACCAGGCCGGCGCCCTGGAGTACAAGGTCACCGCCGC GGCCAACAACTCCACGCTGGCGCGGATCATTCACGCCGTGGAACAGGCCCAAGGGGCACGGGCGCCAACCCAGCGCTTTG TTGACAGTTTCTCCAAGGTCTACACCCCGGCTGTCTTCCTGTTTGCCCTCGGTGTGGCGGTGATTCCGCCGCTGTTCATG GCGGGCGTGTGGTTTGACTGGATCTACCGCGCCCTCGTGCTGCTGGTGGTGGCCTGCCCTTGTGCCTTGGTGATCTCCAC CCCGGTGACCATTGTCAGCGGCCTGGCGGCAGCGGCGCGCAAAGGCATCCTGATCAAGGGCGGCGTGTACCTGGAGGGCG GCTACAAGCTCGACTACCTGGCCCTCGACAAGACCGGCACCATCACCCACGGCAAACCGGTGCAAACCGACTACCTGCCG CTGTTCCCGAACATCGAAGACAGCGCGCCGGCCCTGGCGGCCAGCTTGGCATCGCGCTCCGATCACCCGGTGTCCCTGGC GATTGCCAACGCAGCTGTGGATAAAAACCTGTCGACTCACGCTGTGGATAACTTCGAAGCCCTGGCCGGGCGCGGTGTGC GGGGTGATATCAACGGCCAGACCTATCACCTGGGTAACCACCGCCTGGTGGAAGACCTGGGCTTGTGCTCAGAGGCGTTG GAAGAAAAACTCTTCGCCCTGGAAAAACAAGGCAAGTCCGTGGTGTTGCTGTTGGACAAGTCTGGCCCGCTGGCGCTGTT TGCCGTGGCCGACACGGTCAAGGAGAGCAGCCGCGAAGCTATTCAGCAGTTGCACGACCTGGGCATCAAGACCCTGATGC TCACCGGCGACAACACCCACACTGCCAAGGCCATTGCGGCCCAGGTGGGTATCGACAAGGCCCAGGGCGACCTGTTGCCC ACCGACAAACTGCAAGCCATCGAAACCCTATACGGCCAGGGCCGTCGGGTGGGCATGGTCGGTGACGGTATCAACGACGC CCCGGCCCTGGCCCGTGCCGAGATCGGCTTCGCCATGGCCGCGGCGGGCACCGACACCGCTATCGAGACCGCCGACGTGG CGCTGATGGACGATGATTTGCGCAAGATTCCGGCTTTCATTCGGTTGTCGCGGCAAACGTCGAGTATCCTCAAGCAGAAC ATCGCCCTGGCGCTGGTGATCAAGGCGATCTTCCTGGCCGTCACGTTCATGGGCATGGCGACCATGTGGATGGCGGTCTT CGCCGACATGGGCGTGAGCCTGCTCGTGGTGTTCAATGGCCTGCGCCTGGTGCGCAAATAG Protein sequence : MSHSIHTPHKHDHKHDHDHDHDHDHGHDHKHDHGPAKLTPVDNHGHSGSCCSGAAGPAIVTLSEAPTAGSRLSTFRIEAM DCPTEQTLIQNKLGKLAGVQQLEFNLINRILGVTHDLPNTAPIIEAIKSIGMQADPIEEGSPAAAPPAKKHWWPLAVSGV GALGAEVLHFTGVAPTWVIALVALVSILSGGLTTYKKGWIALKNFNLNINALMSIAVTGAILIGQWPEAAMVMFLFTVAE LIEAKSLDRARNAISGLMQMTPEQATVRQADGSWLEQEVKSIDLGAIVRVKPGERIGLDGEVTAGQSTIDQAPITGESLP IEKTVGDKVFAGTINQAGALEYKVTAAANNSTLARIIHAVEQAQGARAPTQRFVDSFSKVYTPAVFLFALGVAVIPPLFM AGVWFDWIYRALVLLVVACPCALVISTPVTIVSGLAAAARKGILIKGGVYLEGGYKLDYLALDKTGTITHGKPVQTDYLP LFPNIEDSAPALAASLASRSDHPVSLAIANAAVDKNLSTHAVDNFEALAGRGVRGDINGQTYHLGNHRLVEDLGLCSEAL EEKLFALEKQGKSVVLLLDKSGPLALFAVADTVKESSREAIQQLHDLGIKTLMLTGDNTHTAKAIAAQVGIDKAQGDLLP TDKLQAIETLYGQGRRVGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPAFIRLSRQTSSILKQN IALALVIKAIFLAVTFMGMATMWMAVFADMGVSLLVVFNGLRLVRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 67 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 1e-114 | 47 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 2e-115 | 43 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 2e-115 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadA_1 | YP_006326494.1 | cadmium-translocating P-type ATPase | BAC0298 | Protein | 0.0 | 66 |
