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Name : thiC (PflA506_0479) Accession : YP_006322017.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 555714 - 557603 bp Length : 1890 bp Strand : + Note : identified by match to protein family HMM PF01964; match to protein family HMM TIGR00190 DNA sequence : ATGAGTACAAAACTAAAAAATACCGTGCACCTGAGTGAATCGGCCAAGGTCGACTCCGGCTCCGTGCAGCCGTTTACCCG CTCGCAGAAAATCTACGTGCAGGGCTCCCGCCCGGATATTCGCGTGCCGATGCGCGAGATCAGCCTGGACGTCACGCCCA CCGATTTCGGCGGCGAAATCAACGCGCCGGTTACCGTCTACGACACCTCAGGCCCCTACACCGACCCGAATGTGATTATC GACGTGCGCAAAGGCCTGGCCGACGTGCGCTCGCCGTGGATCGAAGTACGCGACGACACCGAGCGCCTGCCCGGTCTCAC CTCGCACTTCGGCCAGCAGCGCTTGAGCGACGCCGAACTGACTGCCCTGCGTTTTGCCCATGTAAAGAACCCGCGCCGCG CCAAGGCCGGTGCCAACGTCACGCAAATGCATTACGCGCGCAAAGGCATCATCACGGCCGAGATGGAATACGTCGCCATC CGCGAAAACATGAAGCTTGAAGAAGCCCGTGCCAGTGGCTTGCTGGATCAGCAGCACGCCGGCCACAGCTTCGGCGCCAG CGTGCCGAAAATCATCACGCCTGAATTCGTACGCGAAGAAATCGCCCGGGGCCGCGCGATCATCCCGGCCAACATCAACC ACACCGAGCTGGAACCGATGATCATCGGCCGTAACTTCCTGGTGAAGATCAACGGCAACATTGGCAACAGCGCCCTGGGT TCGTCCATCGAAGAGGAAGTGGCGAAGCTCACCTGGGGCATTCGCTGGGGCTCGGACACGGTGATGGACCTGTCCACCGG TAAACACATCCACGAAACCCGCGAGTGGATCATCCGCAACTCGCCAGTGCCAATCGGGACCGTGCCGATCTACCAGGCCC TGGAAAAAGTCGGGGGCGCCGCCGAAGACCTGACCTGGGAGCTGTTCCGCGACACCTTGATCGAACAGGCCGAGCAGGGC GTCGACTACTTCACCATCCACGCTGGGGTATTGCTGCGGTATGTGCCGCTGACTGCCAAGCGCGTGACCGGCATCGTCTC CCGTGGTGGTTCGATCATGGCCAAGTGGTGCCTGGCCCACCACAAAGAGAACTTCACCTACACGCATTTCGACGAAATCT GCGAAATCATGAAGGCCTATGACGTCAGCTTCTCCCTTGGCGATGGCTTGCGCCCGGGTTCGATTGCCGATGCCAACGAC GCCGCGCAATTCGGCGAACTGGAAACCCTGGGCGAACTGACCAAGACCGCCTGGAAGCACGACGTGCAAACCATGATCGA AGGCCCCGGCCATGTGCCGATGCAGTTGATCAAGGAGAACATGGACAAGCAACTGGAGTGCTGCGACGAGGCGCCGTTCT ACACCCTAGGCCCGCTGACCACCGACATTGCGCCCGGCTATGATCACATCACTTCGGGTATCGGCGCGGCAATGATCGGC TGGTTCGGTTGTGCCATGCTCTGCTACGTCACACCCAAGGAGCACCTGGGCTTGCCGAACAAGGATGACGTGAAGACCGG GATCATTACCTACAAGATCGCGGCCCACGCGGCCGACCTCGCCAAAGGCCACCCCGGCGCGCAGATTCGCGATAACGCCT TGAGCAAGGCGCGCTTCGAGTTCCGCTGGGAAGACCAGTTCAACCTCGGCCTGGACCCGGATACCGCACGTTCATATCAC GATGAAACCTTGCCGAAGGACTCGGCCAAGGTCGCGCATTTCTGTTCGATGTGCGGGCCTAAGTTCTGTTCGATGAAAAT CACCCAGGAAGTGCGTGAGTACGCGGCCAACCAGCGCATCGATGCGGTGGATGTGGATGTGGCCAAGGGCTTGGCCGAGC AGGCTGAGCGGTTCAAGCAGGAAGGTAGCCAGCTCTACAAGAAGGTCTGA Protein sequence : MSTKLKNTVHLSESAKVDSGSVQPFTRSQKIYVQGSRPDIRVPMREISLDVTPTDFGGEINAPVTVYDTSGPYTDPNVII DVRKGLADVRSPWIEVRDDTERLPGLTSHFGQQRLSDAELTALRFAHVKNPRRAKAGANVTQMHYARKGIITAEMEYVAI RENMKLEEARASGLLDQQHAGHSFGASVPKIITPEFVREEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALG SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGAAEDLTWELFRDTLIEQAEQG VDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFTYTHFDEICEIMKAYDVSFSLGDGLRPGSIADAND AAQFGELETLGELTKTAWKHDVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARSYH DETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRIDAVDVDVAKGLAEQAERFKQEGSQLYKKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 78 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 78 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 72 |
