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Name : ribD (PflA506_4769) Accession : YP_006326170.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : - COG ID : - EC number : 3.5.4.26 Position : 5252309 - 5253436 bp Length : 1128 bp Strand : - Note : identified by similarity to SP:P25539; match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGACATCTGAACAGGCTGTGCTCGACGCCCACTACATGGCCCGTGCCCTCGAATTGGCGCGCAAGGGCCTGTACACCAC CCACCCCAACCCGCGGGTTGGCTGTGTGATCGTGCGTGACGGGCAGATTGTCGGCGAAGGCTGGCATGAGCGCACCGGCG AGCCCCATGCCGAGCCCAATGCCCTGCGCGCCGCTGGCGACAAGGCCCGTGGCGCGACGGTGTACGTGACCCTTGAACCG TGCAGCCATCATGGCCGTACGCCGCCCTGTGCCGATGCGCTGGTGACCGCCGGCGTCGCGCGGGTGGTGGCCGGCATGCA GGACCCGAACCCCGAAGTGGCTGGCCGAGGCATGCAACGCCTGGCCCAGGCCGGTATCGAGGTTCGTAGTGGTGTGCTGG AAACCGAAGCGCGGGCGCTTAACCCCGGCTTCCTCAAGCGCATGGAGCGCGGCCTGCCGTTTGTGCGGGTCAAGCTGGCG ATGAGCCTGGACGGCCGCACGGCGATGGCCAGCGGCGAAAGCCAATGGATCACCGGCCCCGCCGCCCGTGCTGCGGTGCA ACGCTTGCGTGCCGAGGCCAGTGTGGTGTTGACCGGTGCCGACACGGTACTGGGCGACGGTGCCCGCTTGACCGTACGCG CCGCCGAACTGGGCCTGGACGACGCAACCACCGCCCTGGCCATGTCGCGCCCGCCGTTGCGCGTGCTGATCGATGGCCGC CTGCGGGTGCCGCTCAACGCACCGTTCTTCAAGGCCGGCCCGGCATTGGTCATCACCTGCGTGACTCCGGAAAACCAGTT CCCCCGCGGCCCTGAGTGCCTTGTGGTTCCAGGTGTGGAGGGCCAGGTTGACCTGCGCTCGGCATTGGTCGCCCTGGCTG CCCGTGGCGTCAACGATGTGTTGGTGGAAGCCGGCCCAAGCCTGGCCGGCGCGTTTGCCCAACAAGGCCTGGTGGATGAA TACGTGATATTCATCGCCGGCAAGTTCCTCGGCTCCGCTGCCCGCCCGTTGCTGGACTGGCCGCTTGATAAGTTGGCCGA TGCTCCCCAACTCAAGATCACCGAAATGCGCGCTGTGGGCGACGACTGGCGAGTCACTGCCATCCCCGTCCCAGCAGTGA GCGTATAA Protein sequence : MTSEQAVLDAHYMARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNALRAAGDKARGATVYVTLEP CSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEVRSGVLETEARALNPGFLKRMERGLPFVRVKLA MSLDGRTAMASGESQWITGPAARAAVQRLRAEASVVLTGADTVLGDGARLTVRAAELGLDDATTALAMSRPPLRVLIDGR LRVPLNAPFFKAGPALVITCVTPENQFPRGPECLVVPGVEGQVDLRSALVALAARGVNDVLVEAGPSLAGAFAQQGLVDE YVIFIAGKFLGSAARPLLDWPLDKLADAPQLKITEMRAVGDDWRVTAIPVPAVSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 4e-66 | 46 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 4e-66 | 46 |
