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Name : glcA (PflA506_4573) Accession : YP_006325977.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : glycolate permease GlcA Function : - COG functional category : - COG ID : - EC number : - Position : 5037526 - 5039220 bp Length : 1695 bp Strand : + Note : identified by similarity to SP:Q46839; match to protein family HMM PF02652; match to protein family HMM TIGR00795 DNA sequence : ATGCAAACCTGGCAACAGCTTTACAGCCCACTCGGCAGCCTCGGCCTGTCCGCACTGGCCGCCGTCATTCCTATCGTATT CTTCTTCCTGGCGCTGGCCGTGTTCCGCCTCAAAGGCCATGTGGCCGGCAGCATCACCCTGGCCCTGTCGATCCTGGTCG CCATTTTCGCCTTCCAGATGCCCGTAGACATGGCATTGGCTGCGGCCGGTTATGGTTTTGCCTACGGCCTGTGGCCCATC GCCTGGATCATCGTCGCAGCGGTATTCCTGTACAAATTGACGGTCAAGAGCGGCCAGTTCGAAATCATCCGCAGCTCCGT TTTGTCGATCACCGACGACCAGCGCTTGCAGGTGTTGCTGATCGGTTTTTGCTTTGGTGCCTTCTTGGAAGGTGCGGCCG GTTTTGGCGCGCCCGTGGCGATCACCGCCGCGCTGCTGGTAGGCCTGGGTTTCAACCCGCTGTACGCCGCCGGCTTATGC CTGATTGCCAATACCGCGCCCGTGGCTTTCGGCGCATTGGGCATTCCGATCATTGTCGCCGGCCAGGTCACCGGTATTGA TGCGTTCAAGATTGGCGCCATGACCGGCCGCCAACTGCCGCTGCTGTCGCTGTTCGTGCCGTTCTGGCTGGTGTTCATGA TGGACGGCCTGCGCGGCGTTCGCGAAACCTGGCCGGCAGCCTTGGTGGCGGGCTTGAGCTTTGCCGTCACCCAATATTTC ACCTCCAACTTCATTGGCCCAGAGCTGCCGGACATCACCTCGGCACTCGCCAGCCTGATTGCCCTGACGCTGTTCCTGAA AGTCTGGCAGCCCAAGCGCACCGCAGGCGCACAAATTGCCGGCGCCTCCTCCAGCGTAGCGGTCACTTCCAGCGCCGGCG GCTTCGGCTTGCCACGCAACACCGTGGTTTCGCCCTACAGCCTGGGGCAAATTTTCAAGGCGTGGTCGCCGTTCCTGATC CTCACCGTACTGGTGACCATCTGGACTCTCAAACCCTTCAAGGCCCTGTTCGCCGCGGGCGGCTCGATGTACGGCTGGGT GTTCAATTTCGCGATCCCGCACCTGGATCAACTGGTGGTTAAAGTCGCGCCCATCGTGACCAACCCCACCGCCATCCCGG CCGTCTTCAAGCTGGACCCGATATCTGCCACCGGCACTGCAATCTTCTTCTCGGCACTGGTCTCCATGCTGGTGTTGAAA ATCGACGTCAAAACTGGTCTTACCACTTTAAAAGAAACCTTCTTTGAGCTGCGCTGGCCGATCCTGTCCATCGGCATGGT GCTGGCATTCGCCTTCGTCACCAACTACTCCGGCATGTCCTCGACCATGGCGCTGGTTCTGGCGGGCACCGGTGCAGCCT TCCCGTTCTTCTCGCCATTCCTTGGCTGGTTGGGAGTTTTCCTGACAGGCTCCGATACCTCATCCAACGCCCTGTTCAGC TCACTGCAAGCCACTACCGCGCACCAGATCGGCGTCAACGACACCCTGCTGGTAGCCGCGAACACCAGCGGTGGCGTGAC CGGCAAAATGATCTCGCCGCAATCGATCGCCGTGGCCTGCGCCGCCACCGGCCTGGTGGGCAAGGAATCCGACCTGTTCC GCTTTACCCTCAAGCACAGCCTGTTTTTTGCCACCATCGTCGGGCTGATCACCTTGGCGCAGGCGTACTGGTTCACCGGT ATGCTGGTGCACTGA Protein sequence : MQTWQQLYSPLGSLGLSALAAVIPIVFFFLALAVFRLKGHVAGSITLALSILVAIFAFQMPVDMALAAAGYGFAYGLWPI AWIIVAAVFLYKLTVKSGQFEIIRSSVLSITDDQRLQVLLIGFCFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLC LIANTAPVAFGALGIPIIVAGQVTGIDAFKIGAMTGRQLPLLSLFVPFWLVFMMDGLRGVRETWPAALVAGLSFAVTQYF TSNFIGPELPDITSALASLIALTLFLKVWQPKRTAGAQIAGASSSVAVTSSAGGFGLPRNTVVSPYSLGQIFKAWSPFLI LTVLVTIWTLKPFKALFAAGGSMYGWVFNFAIPHLDQLVVKVAPIVTNPTAIPAVFKLDPISATGTAIFFSALVSMLVLK IDVKTGLTTLKETFFELRWPILSIGMVLAFAFVTNYSGMSSTMALVLAGTGAAFPFFSPFLGWLGVFLTGSDTSSNALFS SLQATTAHQIGVNDTLLVAANTSGGVTGKMISPQSIAVACAATGLVGKESDLFRFTLKHSLFFATIVGLITLAQAYWFTG MLVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 2e-154 | 76 |
