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Name : treC (PflA506_4346) Accession : YP_006325762.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : - COG ID : - EC number : 3.2.1.93 Position : 4800487 - 4802133 bp Length : 1647 bp Strand : - Note : identified by similarity to SP:P39795; match to protein family HMM PF00128; match to protein family HMM TIGR02403 DNA sequence : ATGCAAACCTGGCAACACTCGGTGATCTACCAGATCTACCCCAAAAGCTTCCACAGCCACGCGGGTAACGCCACCGGTGA CCTGTTGGGCATCGTGGACAAACTCGACTACCTCAAATGGCTGGGCGTGGATTGCCTGTGGGTCACCCCGTTCCTGCGCT CGCCCCAGCGCGACAACGGCTACGACATCAGCGACTACTACGCCATCGACCCCAGCTACGGCACTATGGCCGACTGCGAC CTGCTGATCAGCGAAGCCGCCAAGCGTGGTATCAAGCTGATGCTCGATATCGTGGTCAACCACACCTCCATCGAACACGA ATGGTTCCAGCAGGCGCGCAGCAGCCTCGACAATCCCTATCGTGACTTCTACATCTGGCGCGACCAGCCGAACAACTGGG AATCCAAGTTCGGCGGCTCGGCCTGGGAGTACGAAGCGCAGACTGGCCAGTACTACCTGCATCTGTTCGACCATACACAG GCCGACCTCAATTGGGACAACCCCCAGGTGCGCGCCGAAGTGTTCAAGATGATGCGCTTCTGGCGCGACAAAGGCGTGGG CGGCTTCCGCCTGGATGTGATCAACCTGATCTCCAAGCCCGCCGACTTCCCCGAGGACAACAGCGACGGCCGCCGCTTCT ACACCGACGGCCCGAACGTGCACCAATACTTGCAGCAAATGCACCGTGAAGTCTTTGAAGGCCATGACCTTATCAACGTG GGCGAGATGTCATCCACCCGCCTGGAACACTGCATTCGCTACTCGAATCCAGCGTCTAAAGAACTGTCGATGACCTTCAA CTTCCACCACCTGAAAGTCGATTACCCCAACCTGCAAAAGTGGGTGAAGGCTGACTTCGACTTCCTGCAACTCAAGCAGA TTTTCTCCGACTGGCAGATGGGCATGCAGGCCGGCGGCGGCTGGAACGCGTTGTTCTGGTGCAACCACGACCAGCCACGG GTGGTCTCGCGCTTTGGTGACGACGGCCAATACCGCGTGGTCTCGGCCAAGATGCTTGCCACGGCGCTGCACTTTTTGCA GGGCACGCCGTATGTGTATCAGGGCGAAGAGTTGGGTATGACCAATCCAGGCTTCGACAGCATCTCGCAATACCGCGATG TGGAAACCCTGAACATCTTCCGGCTCAAGCGCGACGCGGGAGAGTCCGAAGCCTCGAGCATGGCGGCGATCATGCAGAAG TCCCGCGATAACGGGCGTACGCCCATGCAGTGGAGCACCGAAGCGAACGCGGGGTTCAGCCGCGGTGAACCCTGGATCGG CATTCCCGCGAATGCTGCGCAGATCAACGTCGCAAGCCAGATGGATGACACGGATTCGGTGCTGCATCACTACCGCAGGC TGATCGATCTGCGCCGTCGCGAACCGCTGATACAGCAAGGCATTTACCGCCCGATGCTGCAAGACCATCGCCAGGTATGG GCGTACCTGCGTGAAGGCCACGGCGAGCGCCTGTTGGTACTCAACAACTTCTATGGATCGCCATGCGAGATCCAGCTGCC AGAAGGCGTGATCAACGCCGAGAGCGAGCAACGCCTGTTGATCAGCAACTACCCCGACTGCCCCCTGCGCACGAGCACTG TGCTGTTACGTCCTTATGAATCCTTCGTGCTGCACCTGACTGATTGA Protein sequence : MQTWQHSVIYQIYPKSFHSHAGNATGDLLGIVDKLDYLKWLGVDCLWVTPFLRSPQRDNGYDISDYYAIDPSYGTMADCD LLISEAAKRGIKLMLDIVVNHTSIEHEWFQQARSSLDNPYRDFYIWRDQPNNWESKFGGSAWEYEAQTGQYYLHLFDHTQ ADLNWDNPQVRAEVFKMMRFWRDKGVGGFRLDVINLISKPADFPEDNSDGRRFYTDGPNVHQYLQQMHREVFEGHDLINV GEMSSTRLEHCIRYSNPASKELSMTFNFHHLKVDYPNLQKWVKADFDFLQLKQIFSDWQMGMQAGGGWNALFWCNHDQPR VVSRFGDDGQYRVVSAKMLATALHFLQGTPYVYQGEELGMTNPGFDSISQYRDVETLNIFRLKRDAGESEASSMAAIMQK SRDNGRTPMQWSTEANAGFSRGEPWIGIPANAAQINVASQMDDTDSVLHHYRRLIDLRRREPLIQQGIYRPMLQDHRQVW AYLREGHGERLLVLNNFYGSPCEIQLPEGVINAESEQRLLISNYPDCPLRTSTVLLRPYESFVLHLTD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-122 | 45 |
