Gene Information

Name : rplS (PflA506_4319)
Accession : YP_006325735.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4769610 - 4769960 bp
Length : 351 bp
Strand : -
Note : identified by similarity to SP:P02420; match to protein family HMM PF01245; match to protein family HMM TIGR01024

DNA sequence :
ATGACTAACAAAATCATCCTTGCACTCGAAGCAGAGCAGATGACCAAAGAGATCCCTACCTTTGCCCCGGGCGACACCAT
TGTCGTTCAGGTGAAAGTGAAGGAAGGCGACCGTTCGCGTCTGCAAGCGTTCGAAGGCGTGGTAATCGCCAAGCGTAACC
GTGGTGTGAACAGTGCTTTCACTGTTCGTAAAATCTCCAACGGTGTTGGCGTAGAGCGTACTTTCCAGACCTACAGCCCG
CAAATCGACAGCATGGCCGTCAAGCGTCGCGGTGACGTACGTAAAGCCAAGCTGTACTACCTGCGTGACCTGTCCGGTAA
AGCAGCTCGCATCAAGGAAAAACTGGCTTAA

Protein sequence :
MTNKIILALEAEQMTKEIPTFAPGDTIVVQVKVKEGDRSRLQAFEGVVIAKRNRGVNSAFTVRKISNGVGVERTFQTYSP
QIDSMAVKRRGDVRKAKLYYLRDLSGKAARIKEKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 4e-33 68
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 6e-29 59