Gene Information

Name : hom (PflA506_4314)
Accession : YP_006325730.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.3
Position : 4763988 - 4765292 bp
Length : 1305 bp
Strand : -
Note : identified by similarity to SP:P29365; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447

DNA sequence :
GTGAAACCGGTCAAAGTAGGCATCTGTGGGTTAGGGACCGTCGGTGGCGGTACCTTCAACGTACTTCAGCGTAACGCTGA
AGAAATTTCCCGCCGCGCAGGTCGCGGGATTGAAGTGGCGCAGATTGCCACGCGTTCGCCAAAGCCTCAGTTCGAAACGA
CCGGTATTGCGATTACCAACGATGTGTTCGCCGTGGCCACCAACCCTGAGATCGATATCGTCATCGAACTGGTTGGCGGC
TACACCGTGGCCCGCGAGTTGGTGCTCAAGGCCATTGAGCACGGCAAGCACGTGGTCACCGCCAACAAGGCGCTGATCGC
CGTGCACGGCAACGAGATCTTCGCCAAGGCCCGCGAGAAAGGCGTGATCGTGGCGTTCGAAGCCGCGGTGGCCGGTGGTA
TCCCGGTGATCAAGGCAATCCGCGAAGGCCTGTCCGCCAACCGCATCAACTGGGTGGCCGGCATCATCAACGGCACCGGT
AACTTCATCCTCACCGAAATGCGCGAGAAGGGCCGTACCTTCGAAGACGTGCTGGCCGAAGCCCAGGCCCTGGGTTACGC
GGAAGCCGACCCGACCTTCGACGTGGAAGGCATCGACGCGGCCCACAAGCTGACCATCCTGGCGTCCATCGCTTTTGGTA
TCCCGCTGCAATTCGACAAGGCCTACACCGAAGGCATCACCAAGCTGACCACCGCCGACGTGAACTACGCCGAAGCCCTG
GGCTACCGCATCAAGCACCTGGGCGTAGCGCGCAGCACCCCGGCCGGTATCGAATTGCGGGTGCACCCGACGCTGATCCC
GGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCGGTGATGGTCAACGGTGACGCCGCCGGTTCCACCCTGT
TCTACGGCGCCGGTGCCGGCATGGAGCCGACCGCTTCGTCAGTGATCGCCGACCTGGTGGACGTGGTTCGCGCCATGACC
AGCGACCCGGAAAACCGTGTGCCGCACCTGGCCTTCCAGCCGGACTCGCTGTCGGCCCACCCGATCCTGCCGATCGAAGC
CTGCGAAAGTGCCTACTACCTGCGCATCCAGGCCCAGGACCATCCAGGCGTGCTGGCCCAGGTGGCCAGCATCCTGTCGG
AGCGCGGTATCAACATCGAGTCGATCATGCAGAAGGAAGTCGAGGAACAAAACGGCCAGGTGCCGATGATCCTGCTGACC
CACCGCGTGCTCGAACAGCACATCAACGATGCCATCCATGCCCTGGAAGCCTTGCAAGGCGTGGTCGGCCCGGTGGTGCG
GATTCGCGTCGAACACTTGAACTAA

Protein sequence :
MKPVKVGICGLGTVGGGTFNVLQRNAEEISRRAGRGIEVAQIATRSPKPQFETTGIAITNDVFAVATNPEIDIVIELVGG
YTVARELVLKAIEHGKHVVTANKALIAVHGNEIFAKAREKGVIVAFEAAVAGGIPVIKAIREGLSANRINWVAGIINGTG
NFILTEMREKGRTFEDVLAEAQALGYAEADPTFDVEGIDAAHKLTILASIAFGIPLQFDKAYTEGITKLTTADVNYAEAL
GYRIKHLGVARSTPAGIELRVHPTLIPADRLIANVNGVMNAVMVNGDAAGSTLFYGAGAGMEPTASSVIADLVDVVRAMT
SDPENRVPHLAFQPDSLSAHPILPIEACESAYYLRIQAQDHPGVLAQVASILSERGINIESIMQKEVEEQNGQVPMILLT
HRVLEQHINDAIHALEALQGVVGPVVRIRVEHLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 3e-115 59
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 3e-115 59