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Name : aer (PflA506_3857) Accession : YP_006325296.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : aerotaxis receptor Aer Function : - COG functional category : - COG ID : - EC number : - Position : 4274017 - 4275582 bp Length : 1566 bp Strand : + Note : identified by similarity to GB:AAD22405.1; match to protein family HMM PF00015; match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM TIGR00229 DNA sequence : ATGCGTAATAACCAACCCGTTACCCAGCGCGAACGTACCTTCCCCGCTCAGCAACGGTTGATCTCCACCACAGATGCCAA GGGTGTGATTACCTACTGCAACGACGCCTTTGTCGAAATCAGTGGGTTCACCCGCGAAGAACTGGTGCGCGCGCCACACA ACCTGGTGCGTCACCCGGATGTGCCGCCGGCCGTGTTCGCGCATATGTGGTCCACGCTCAAACAAGGCTTGCCATGGATG GGCATTGTCAAGAATCGCTGCAAGACCGGTGACCACTATTGGGTTAACGCCTATGTGACGCCGGTCTTCGACGGTAACCA GGTGATCGGCTACGAATCGGTGCGCATCAAGCCCACCGCCGAGCAGATCCGCCGGGCCGAAGCGCTCTATCAACGCATCA ACCAAGGCAAGTCGGCCGTCCCCCAACGGGACAAGTGGCTGCCGGTGTTGCAGGACTGGCTGCCGTTTATCCTGGTCAGC CAGTTAAGCTTCATGATCGGCGCCACCCTCACCTCCCAATGGGGCTTTGCCCTGGCAGCGGCGCTGTCGGTGCCGTTGGG CCTGCTGGGCTTGAGCTGGCAACAGCGCGGTCTCAAGCGTTTGCTGCGCCTGGCCGAACAGACCACGTCCGACCCGTTGA TCGCGCAGATGTACACCGACAGCCGTGGCGCACAAGCGCGCCTGGAAATGTCGATCCTCAGCCAGGAAGCGCGTCTGAAG ACCTGTCTTACCCGCCTGCAGGACACCGCCGAGCACCTCAACGACCAGGCCGCGCAATCCAACACCCTGGCGCACAACAG CTCCAGCGGCCTGGAACGCCAGCGCGTGGAAACCGAACAGGTGGCCACTGCGGTAAACCAGATGGCGGCGACCACCCAAG AAGTGGCCAGCCACGTGCAGCGCACCGCCGACGCCACCCAGGAAGCCAACCGCCTGACCGGCCGCGGCCGCGATATCGCT GGGGAAACCCGCGAGGCGATTCAGCGTCTTTCGGCAGCCGTTGGAGAGACCGGTGTGACCGTCACGCAACTGGCCAAAGA CAGCGATGAAATCGGCGGCGTGGTTGATGTGATCAAAGGCATTGCCGACCAGACCAACCTGCTGGCACTCAACGCCGCTA TCGAAGCCGCGCGTGCCGGTGAGATGGGCCGTGGTTTTGCAGTGGTCGCCGATGAAGTGCGCCAACTGGCGCAGCGTACG GCCGAATCCACCGGGCAGATCCATACCCTGATCGCCAAGCTGCAACACACCGCGGCTGCGGCCGTGCAAACCATGGACGC CGGGCACCGCCAAGCCGAAGAAGGTGTGGCACGGGTGATGGAAGCAGACCAGGCCTTGGTAGGTATCAGTGAGGCGGTGG CCAATATCACCGACATGACCACCCAGATCGCAGCCGCAACCGAGGAGCAAAGTGCGGTGGCCGAGGAGATCAGCCGCAAC ATCAGCACCATTGCGCTGTTGGCGGACCAGACCTCGGAGCAGGCGATGAACTCGGCGCAACTGAGTGAAGAGTTGACGCA TACCGCCAATACCCAGTATTCGCTGGTAGAGCGTTTTAACCGATAA Protein sequence : MRNNQPVTQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFTREELVRAPHNLVRHPDVPPAVFAHMWSTLKQGLPWM GIVKNRCKTGDHYWVNAYVTPVFDGNQVIGYESVRIKPTAEQIRRAEALYQRINQGKSAVPQRDKWLPVLQDWLPFILVS QLSFMIGATLTSQWGFALAAALSVPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILSQEARLK TCLTRLQDTAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIA GETREAIQRLSAAVGETGVTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT AESTGQIHTLIAKLQHTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVANITDMTTQIAAATEEQSAVAEEISRN ISTIALLADQTSEQAMNSAQLSEELTHTANTQYSLVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 4e-75 | 41 |
