Gene Information

Name : PflA506_3686 (PflA506_3686)
Accession : YP_006325128.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4083404 - 4084084 bp
Length : 681 bp
Strand : -
Note : identified by similarity to SP:P52076; match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGCACGTACTGGTCTGTGAAGACGACGAACTGATCGCCAGTGGCATTGTGGCCGGCCTGACCGCCCAGGGCTTTACCGT
GGAGCGCGTGGCCACGGCCTCGGCGGCGCGGGCGATGCTCAAGGCCGCGGCCTTCGACATCATGGTGCTCGACCTTGGCC
TGCCCGACGAAGACGGCCTCAAGCTGCTGCAACAACAACGCAGCCAGGGGTTGGACATTCCGGTGCTGATCCTCACCGCG
CGGGACTCGGTGACCAACCGCGTCGACGGCCTGCAAGCCGGCGCCGACGACTACCTGCTCAAGCCCTTCGACCTGCGTGA
ACTCGCTGCTCGCCTGCAAACCCTGCTGCGCCGTGTGGCGGGACGCAGCGTCAATCTGATCGAACATGGCCGCCTGGCCT
ACGACCCCAGCAGCCGCGAGACCTTCCTCGGCGGCCAGCCGGTAGATTTGTCCCGGCGTGAACAGGCGTTGTTGCAGGCG
CTTTTGCACAACAAGGGCCGCGTACTGTCCAGTGAACAGCTCAAGGACAGCGTCTACGGCTTCAGCGACGAACTGGAAAG
CAACGCCCTCAACGTGCATATCCACCACCTGCGGCGCAAGTTGGGCAATGGCATCGTCGAAACCGTCAGGGGGCTGGGCT
ATCGCCTGGGCACCGCTGATGGGGGAGAAAACACGCCGTGA

Protein sequence : 
MHVLVCEDDELIASGIVAGLTAQGFTVERVATASAARAMLKAAAFDIMVLDLGLPDEDGLKLLQQQRSQGLDIPVLILTA
RDSVTNRVDGLQAGADDYLLKPFDLRELAARLQTLLRRVAGRSVNLIEHGRLAYDPSSRETFLGGQPVDLSRREQALLQA
LLHNKGRVLSSEQLKDSVYGFSDELESNALNVHIHHLRRKLGNGIVETVRGLGYRLGTADGGENTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-51 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PflA506_3686 YP_006325128.1 DNA-binding response regulator BAC0487 Protein 2e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PflA506_3686 YP_006325128.1 DNA-binding response regulator VFG1389 Protein 2e-26 44
PflA506_3686 YP_006325128.1 DNA-binding response regulator VFG0473 Protein 8e-39 41
PflA506_3686 YP_006325128.1 DNA-binding response regulator VFG1390 Protein 4e-28 41