Gene Information

Name : PflA506_3533 (PflA506_3533)
Accession : YP_006324981.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : iron chelate uptake ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3934642 - 3935646 bp
Length : 1005 bp
Strand : +
Note : identified by match to protein family HMM PF00950; match to protein family HMM PF01032

DNA sequence :
ATGATGCGCACCCTACTCGCCCTGGCGTTGCTGCTGCTCGCCCTGCTCGCTGGCGTCGCCATCGGTGAAACCGCTATCGA
ACCGCAGGTGGTGCTGCAGGTGCTCGCCAATAAACTCTGGGGCGCCGGCTACGTACTGGACCCCATCGACGAAGGCGTGG
TGTGGAACTACCGCCTCACCCGTGCATTGGTGGCCGCAGCTTGCGGCGCAGGGTTGGCAACGTGCGGGGTGATCCTGCAA
TCGCTGCTGCGTAACCCGCTGGCCGACCCGTACCTGCTGGGCATCAGCGCCGGCGCGTCAACCGGCGCGGTGCTCGTGGC
CTTGATCGGCGTGGGCGGTGGCCTGGTGTCGTTGTCGGCGGGCGCGTTTGTGGGGGCGATGGCGGCCTTTGCGCTGGTGA
CGCTGCTGGCGCGGGCCAGCGGATCGTCCAGCGGTACCGGGCAGATCATCCTCGCGGGCATCGCCGGCTCGCAGTTGTTT
AATGCCCTGACCGCGTTCCTGATCACCAAGTCGGCCAGCTCCGAACAAGCCCGCGGCATTATGTTCTGGCTGCTGGGCAA
CCTCAGCGGCGTGCGCTGGCCGTCGGTGTGGTTGGCGGTGCCGGTGGCGGTCGTGGGGCTCGCAGTGTGCCTGTGGCACC
GGCGTGCACTGGATGCGTTCACCTTCGGCAGCGACTCGGCGGCCTCCCTCGGCATCCCGGTGCGCCGCGTGCAATTTGTG
CTGGTGGCCTGCGCCGCGCTGGTGACGGCGGTGATGGTGTCCATCGTCGGCTCCATCGGGTTTGTCGGCTTGGTGATTCC
CCATGCGGTGCGCCTGTTGCTTGGCACCGGGCATTCGCGCTTGCTCCCGGCCAGCGCCTTGGGGGGCGCGCTGTTTCTGA
TCGCTGCAGACGTGCTGTCGCGCACCTTGATCAAGGGCCAGGTGATTCCGGTGGGTGTGGTCACGGCATTGGTGGGCGCG
CCGGTGTTTGCGCTGATCCTGATTGGCCGGAGGAATGCGCGATGA

Protein sequence :
MMRTLLALALLLLALLAGVAIGETAIEPQVVLQVLANKLWGAGYVLDPIDEGVVWNYRLTRALVAAACGAGLATCGVILQ
SLLRNPLADPYLLGISAGASTGAVLVALIGVGGGLVSLSAGAFVGAMAAFALVTLLARASGSSSGTGQIILAGIAGSQLF
NALTAFLITKSASSEQARGIMFWLLGNLSGVRWPSVWLAVPVAVVGLAVCLWHRRALDAFTFGSDSAASLGIPVRRVQFV
LVACAALVTAVMVSIVGSIGFVGLVIPHAVRLLLGTGHSRLLPASALGGALFLIAADVLSRTLIKGQVIPVGVVTALVGA
PVFALILIGRRNAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-27 42
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-27 42
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 4e-27 42
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 3e-27 41