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Name : gspE (PflA506_3444) Accession : YP_006324902.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 3849821 - 3851488 bp Length : 1668 bp Strand : - Note : identified by match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02533 DNA sequence : ATGCAGATCCCGCATACCGACCAGGTGTGCGCGTGGCTGATGCAGCACGCCGGGCTCAAAATCGCTGATCTGGAACGCGC CCAGCGTTTATCCACTGAGCCTGGCGACCTGCTCGGTTTACTCACGCGCCTGGGCCTGGTGTCCGAGGTCGAACTGGCTC GCGCCTGGGCCGATTTGCTGAATGCGCCACTGCTGCTGGCCGACGCGGCGCCGCCGTTGCTCGACCCGCTTCCCGTGCTC ACCGAGCGCTTTATGCGTCATTACCAGGTCGTGCCGATGGGTTGGCATCAGGGCGGGTTGCGCGTAATGGCCGCCAACCC GGCGCAGTGGTATCCGTTCCAGGCCCTGGCGTATGCCTGTGAGGTGCCGGTCTGGCTGGCCATCGGTTCGCGTAATGAAG TCGACACACTGATCGAGCGCTATTACGGCCAGGGCCGTTCCGCCATGGGCAGCCTGATCGAAAACCTCGATGAGCAGGGC GGCGTGCTGGAAGACATCGAACACCTCAAGGACATGGCCTCCGAAGCGCCAGTGATTCGCCTGGTCAATCTGATCCTGCA GCGCGCCGTGGAACAGCGCGCCTCGGATATCCATATCGAACCCTTCGAAAACCAACTCAAGGTGCGCTACCGCATCGACG GCGTGCTGCACGACGCCGAAGCACCGCCTGCCAGTTCGTCGGCGGCGGTGATCTCGCGGGTGAAGATAATGGCGCGCCTG GACATCGCCGAACGACGCCTGCCCCAGGACGGGCGCATCATGCTGCGCATCCAGGGCAAGGCGCTGGATCTGCGGGTGTC CACGGTGCCCACCAGCTTCGGCGAGTCGGTGGTGATGCGCCTGTTGGACCGGCAAACCGTGCAATTCGATTTCCCCAGCC TGGGCTTTGATGGCCCGCGCCTGGCGGCCTTCCAGGATCTATTGGCGCGGCCCCACGGCATCCTGTTGGTCACCGGGCCT ACGGGCTCGGGCAAAACCACCACGCTCTATACCGCGTTGTCGCAGCTCAATACCGCTGAACGCAAGATCATCACCGTGGA AGACCCGGTGGAATATCAGCTTGAAGGGATTAACCAGATCCAGGTCAAGCCGGCCATCGGCCTGGACTTTGCCGGAGCGC TGCGCGCCATCGTGCGCCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGACCTGGAAACCTGCCGCATTGCCGTC CAATCGTCACTCACTGGCCATCTGGTCCTCTCGACCCTGCACACCAACAGCGCTGCGGCGAGTATCACGCGCTTGCTGGA CATGGGCGTGGAAAGCTACCTGATTGCCTCCACGGTCAGCGGTATTCTCGCCCAGCGCCTGGTGCGGCGCCTGGACCCGG CCACGCGAGTAGCCTTCCAGGCCCCAGCGGAATTGATCAAGGAGCATGGCCTGGATCGCCTGACCGAGCAGCGTCCGATC CTGCTTTACCGCGGTGACTATCACGGCCGCAGCGCCGTCACTGAATTGTTGGTGATGAACGATGAGTTGCGTGGCTTGCT GATGGGCCACGCCGACGCCGCCAGCCTCGAGCACGCCGCCCGCCGCGCCGGTTTGCGCACCTTGTATGAAGACGGATTGC GCCAGGCCCTGGCCGGTTTCACCTCCCTGGAAGAAGTGCTGCGCGTCACCCGCGGAGATGACGCGTGA Protein sequence : MQIPHTDQVCAWLMQHAGLKIADLERAQRLSTEPGDLLGLLTRLGLVSEVELARAWADLLNAPLLLADAAPPLLDPLPVL TERFMRHYQVVPMGWHQGGLRVMAANPAQWYPFQALAYACEVPVWLAIGSRNEVDTLIERYYGQGRSAMGSLIENLDEQG GVLEDIEHLKDMASEAPVIRLVNLILQRAVEQRASDIHIEPFENQLKVRYRIDGVLHDAEAPPASSSAAVISRVKIMARL DIAERRLPQDGRIMLRIQGKALDLRVSTVPTSFGESVVMRLLDRQTVQFDFPSLGFDGPRLAAFQDLLARPHGILLVTGP TGSGKTTTLYTALSQLNTAERKIITVEDPVEYQLEGINQIQVKPAIGLDFAGALRAIVRQDPDVIMIGEIRDLETCRIAV QSSLTGHLVLSTLHTNSAAASITRLLDMGVESYLIASTVSGILAQRLVRRLDPATRVAFQAPAELIKEHGLDRLTEQRPI LLYRGDYHGRSAVTELLVMNDELRGLLMGHADAASLEHAARRAGLRTLYEDGLRQALAGFTSLEEVLRVTRGDDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-86 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-86 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_006324902.1 | general secretory pathway protein E | VFG0182 | Protein | 5e-89 | 49 |
| gspE | YP_006324902.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-85 | 49 |
| gspE | YP_006324902.1 | general secretory pathway protein E | VFG2426 | Protein | 5e-71 | 46 |
| gspE | YP_006324902.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-87 | 45 |
| gspE | YP_006324902.1 | general secretory pathway protein E | VFG0233 | Protein | 9e-70 | 44 |
| gspE | YP_006324902.1 | general secretory pathway protein E | VFG1880 | Protein | 5e-81 | 41 |
