|
Name : PflA506_3428 (PflA506_3428) Accession : YP_006324886.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : sensor histidine kinase/response regulator Function : - COG functional category : - COG ID : - EC number : - Position : 3832919 - 3836092 bp Length : 3174 bp Strand : + Note : identified by similarity to SP:P14376; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518 DNA sequence : ATGAAGCACAATAACGCGATTCTCGAAGCCTTTACCCGCAGCTCATTGCGCCTGAACAAAGGCTTGATGGTGTTGATGGG AATCGCGTTGCTGCTGATGCTGACCAATTACTGGTCTCTGCACCGGGGCGTCGAAATTCGCTACAGCGCGATGCGCTTTC ACTTTGCGCGGCTGATGGAAAACCTCGCAGAACAGCAAACCTACCTCAAGAGCCTGACACACCCCGGCATCCAGGCCGAA CTGCTGCACGCCACCAACGTGCAGGTCAGCCTCAAAAGCCGCATGGTCGACAACCGTCGCACGCTGTACGAAGGCCAGAA GTATTCGTTTTCGGTGCCCTTCAGCGTCAAGTTCGATGAACAGCAGATCAGCACCGCCGCGAGGCCGCCGATTTTTGCCC TGGGTGCGCACTTGACCAGCTACTACAGCGCCTTCTGGTCCTCCTCGCCGTACGAGGCGCCGCAAACCTTCCTGCTCAAT CGCCAGGCCGACTACGCCATCACCATTCCGTCCGTGGGCTATCAGCACCGCGAAAGCCCCGAGGATACCGACAACCCGGT GGCCCGGGTCAACGCCGTGCAGCAAATCCTTGCACAGGCGCCGCAGCCACTGGAGCAGAATCGGGTGTATTGGCAGGCCG GCCCCGAACCCGAACATTTGCTGGCCTACATCGGCCTGCCACTCGACGCCCAGGGCCAGGCCGTGATCGGCACCCTGCTC GACGTGTCGCAGGTCGACGATGTACAGCGCGCGCTGAATCACTCGGCGTTTGATCGCTTTACCCTGATTGACCCTGACGG TAACCGGTTGATTGGGCCAGCCAACCAGGCGCAGCTCAGCGATGGTGTGCATTTCACGGCCGACGGCTTTGAATTCAAGG TCACCGAGGCCGGCGACCAGCCCTGGAGCGCGGTCTATGGCCTGAACTACTCGCACTTCTTTCACTCCGCATTGTGGCCG TTGAGCACCATGGCGTTGGTGCTGTTCAGCCTGATTACACTGGGTTGGGCTGGCAGCCGATGGTATCGACGCCAGGTGAT CACCCCAGCACAACTGGCCCACGAACGCATCGCCGAAAGCGTGGCGTTCAGCCGCGTGATCATCGACACCGCACCCACTG GGTTATGCGTTGTGCGACGCAGCGATGGCAGGGTATTGATCGAGAACCAGCGCGCCCAGCAGTGGCCGGGCACCTCACGC CTGGTGGAGGCAATGGCCGGTAAGCAAGATGGCGCCGAGAGCGGTGAGACGCACTTGGAGATCGAAGGCCGGCACCTGCA GATCGGCTTTGTGTCGACCCGCTATCAGGCTCAAGACGTACGCCTGTATGCATTCAACGATATCACCCGGCACATCGAAG ACGCCCAGGCCCTGGAAGAGGCACGTCATGCCGCCGATGCGGCCAGCGAGGCCAAGACGCTGTTCCTGGCAACCATGAGC CATGAGATCCGCACGCCGCTTTATGGCGTGCTCGGCACCCTCGAATTGCTCGGCCTGACCGACCTCGACCCGCACCAGAA AACGTACCTGCACACCATCCAGCGCTCGTCCGCCACACTGTTCCAACTGATCAGTGATGTGTTGGATGTCTCGAAGATCG AGTCCGGGCAAATGGCGATAGAAGCCGTGGATTTCTGCCCGCTGGACATGCTCGAAGATACCTTGCACACCTACGCCGCC TTCGCCCGGCGCAAGGGGTTGCAGCTTTACAGTTACATCGACCCGCAGTTGCCGAACTGCCTGATGGGCGACCCGATGCG CATCCGCCAGGTCCTCAATAACCTGGTGAGCAACGCCATCAAGTTCACCGACTTTGGGTGCGTGGTGATTCGTGCCAGGG TGGTGGGCAGCGACGCCAATAATGTCGACCTGGAATGGCAAGTCACCGATTCCGGCGTTGGCATTGCCGAGGCGCAGCAG GCCAAGCTCTTCGATCTGTTCTACCAGGCACCGGACACCGCCAGCGAAGGCGGCACCGGGCTTGGCCTGCCGATTTGCCG GTGGCTGGCGCAGATGATGGACGGCGAAATCCGCGTGGTCAGCGAGCCCGGGCTGGGCAGCAGCTTTACCCTGAAAATGC GCTTGCCACTGTGTTGTGGTGCACTGACCAACCTGCCGCTGATCGAGCCCAGCTCGACGCCGGTGTATGTGCAGGCACCG GTACGCGAACTGGCGCAGGCAATGAGTGACTGGCTCAACCGCTTGGGAATCACCGCCGCCCTGGCCGCGACCACCCAGGA CAAAGACAGTCACCACGCGGTACTGGTAGAACTGTTACCCGGCGATCCCCCTAAGCCATGGCCCGGCCAACGTGTGCTCT GCCTGCCCGGTGCACACAGCCCGCCGCTGCACACAGCCCAAGGCTGGATGGTGGATATGCACGACATACGCACCATCGCC GCCACCGTATCACTGGCGCAGCACGGCAGGCACGAGCAACCCACGGCGACCCGGCCACAAAGCGCCGGGCGGCTAGAGCT GCGCATCCTGGTGGCCGAGGACAATCCGGTCAACCAGGCGATTATCAAGGAACAGCTGGAGGCGCTCGGTTGCTCGGTGA GCCTGGCCGCCAACGGTGAACAGGCGTTGCAGTTATGGCAACCGAAGGCCTTCGACCTGGTGCTGACCGACGTGAATATG CCGTTGATGAATGGCTATGAACTGGCCAGAACCTTGCGTGAGCATGATCCACACTTGCCGATTATCGGCGTGACCGCCAA TGCAATGCGCGAGGAAGGCGTACGTTGCCTGGCAGTGGGCATGAACGCCTGGATCGTCAAGCCCTTGAGCCTGCAAACCC TGCGCGATCAGTTGATCAAACTGTGCAAGGTCAAGTCGCCGGTTGAGCCTGACGCCCAGGTATTCGACGACCGCGTGCAA CTGTCGGACAAGATGCGCCCGCTGTTCATCAGCAGCGTGCAGCAGGATATGCAGCGCATCGGCGCGGCCCTGGTCCAGCG TGATGCTCATGGCCTCGGCCAATTGCTGCACTCGATCGCCGGCGCTCTGGGCGCAGTGCAGGCGCTCAGCCTGGCCCAGG CCTGCATCGAACTGGAAAGCGCACTTAACCGCAGCAGCCTCGACACAACGCTTGAGCTCAAGGTGAAGACTGTGATGCAG CGTCTGTCGGCCGTTCTGGAGACTCTCCAGCTCGGGCACTCTTCACTCACTTGA Protein sequence : MKHNNAILEAFTRSSLRLNKGLMVLMGIALLLMLTNYWSLHRGVEIRYSAMRFHFARLMENLAEQQTYLKSLTHPGIQAE LLHATNVQVSLKSRMVDNRRTLYEGQKYSFSVPFSVKFDEQQISTAARPPIFALGAHLTSYYSAFWSSSPYEAPQTFLLN RQADYAITIPSVGYQHRESPEDTDNPVARVNAVQQILAQAPQPLEQNRVYWQAGPEPEHLLAYIGLPLDAQGQAVIGTLL DVSQVDDVQRALNHSAFDRFTLIDPDGNRLIGPANQAQLSDGVHFTADGFEFKVTEAGDQPWSAVYGLNYSHFFHSALWP LSTMALVLFSLITLGWAGSRWYRRQVITPAQLAHERIAESVAFSRVIIDTAPTGLCVVRRSDGRVLIENQRAQQWPGTSR LVEAMAGKQDGAESGETHLEIEGRHLQIGFVSTRYQAQDVRLYAFNDITRHIEDAQALEEARHAADAASEAKTLFLATMS HEIRTPLYGVLGTLELLGLTDLDPHQKTYLHTIQRSSATLFQLISDVLDVSKIESGQMAIEAVDFCPLDMLEDTLHTYAA FARRKGLQLYSYIDPQLPNCLMGDPMRIRQVLNNLVSNAIKFTDFGCVVIRARVVGSDANNVDLEWQVTDSGVGIAEAQQ AKLFDLFYQAPDTASEGGTGLGLPICRWLAQMMDGEIRVVSEPGLGSSFTLKMRLPLCCGALTNLPLIEPSSTPVYVQAP VRELAQAMSDWLNRLGITAALAATTQDKDSHHAVLVELLPGDPPKPWPGQRVLCLPGAHSPPLHTAQGWMVDMHDIRTIA ATVSLAQHGRHEQPTATRPQSAGRLELRILVAEDNPVNQAIIKEQLEALGCSVSLAANGEQALQLWQPKAFDLVLTDVNM PLMNGYELARTLREHDPHLPIIGVTANAMREEGVRCLAVGMNAWIVKPLSLQTLRDQLIKLCKVKSPVEPDAQVFDDRVQ LSDKMRPLFISSVQQDMQRIGAALVQRDAHGLGQLLHSIAGALGAVQALSLAQACIELESALNRSSLDTTLELKVKTVMQ RLSAVLETLQLGHSSLT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL036 | AAP84163.1 | kinase sensor protein of two component regulatory system | Not tested | PAPI-1 | Protein | 4e-105 | 41 |
