Gene Information

Name : hpaR (PflA506_3402)
Accession : YP_006324861.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradation operon regulator HpaR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3806663 - 3807085 bp
Length : 423 bp
Strand : -
Note : identified by similarity to SP:P62573; match to protein family HMM PF01047; match to protein family HMM TIGR02337

DNA sequence :
ATGTCCACACCTCGACAATCCCTGACCCTGGCCTTGCTGCAAGCGCGCGAGGCCGCGATGAGTTTTTTCCGTCCATCCCT
GAATGAACACGGCCTGACCGAACAGCAATGGCGCATCATCCGCATCCTTGAACAGCATGGTGAGTTGGAGATCTACCAAC
TGGCGGAACTGGCCTGCATCCTCAAGCCGAGCATGACCGGCGTGCTGGTGCGCATGGAAGCGGCCGGCATGGTGCACCGG
CGCAAGGCCGAACAGGACCAGCGCCGGGTGCTGATTACCCTGGCGGACAAGGGCAAAGCGAGTTTTGAGTCCATGAGCCA
GTGCATGGAGGCCAACTACCAGCGCTTGCAGGATCAGTTTGGCGAAGAGAAATTCCAGACCTTGTTGGGGTTGCTGGATG
ACTTGAAGAACATCAAGCGCTGA

Protein sequence :
MSTPRQSLTLALLQAREAAMSFFRPSLNEHGLTEQQWRIIRILEQHGELEIYQLAELACILKPSMTGVLVRMEAAGMVHR
RKAEQDQRRVLITLADKGKASFESMSQCMEANYQRLQDQFGEEKFQTLLGLLDDLKNIKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 6e-30 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hpaR YP_006324861.1 homoprotocatechuate degradation operon regulator HpaR BAC0505 Protein 2e-25 45