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Name : kdsB (PflA506_3150) Accession : YP_006324617.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 3533612 - 3534376 bp Length : 765 bp Strand : - Note : identified by match to protein family HMM PF02348; match to protein family HMM TIGR00466 DNA sequence : ATGACCACCGCCTTTACCGTTGTCATTCCCTCGCGCTATGCCTCGACGCGCCTGCCGGGCAAGCCGCTGCAAATGATCGG CACCAAGCCGATGATCCAGCTGGTGTGGGAACAAGCGTGCAAGAGCAGCGCCGAACGGGTGGTGGTGGCCACCGACGACC CGCGCATCATCGAGGCGTGCAAAGGTTTTGGTGCCGAAGCGGTCCTGACCCGCGAAGACCATAACTCCGGTACTGATCGC CTGGCCGAAGTCGCCACTCAGCTGGGTCTGGCACCCGACGCGATCGTAGTGAATGTGCAGGGTGACGAGCCATTGATACC GCCGAGTGTCATCGATCAGGTCGCTGCCAACCTCGCGGCCCATGGCGAGGCGCGTATGGCGACCCTGGCCGAACCGATCG AAAACATCGAGACGCTGTTCAACCCGAATGTGGTGAAAGTGGTCAGCGACATCAACGGCCTGGCACTGACGTTCAGTCGC TCCACCTTGCCGTGGGCGCGGGATGCCTTTGCCAAGAATCGCGACGTGTTGCCGGAGGGCGTGCCATATCGCCGCCATAT CGGCATCTATGCCTACCGCGCCGGTTTCCTGCACGACTTCGTCAGCTGGGGCCCGTGCTGGCTGGAAAACACCGAGTCCC TGGAGCAACTGCGTGCCCTCTGGCACGGCGTGCGTATCCACGTGGGCGATGCGTTGGAAGCACCGCCAGCCGGTGTCGAC ACCCAGGAAGACCTCGAACGCGTCCGTCGCCTGCTGGGTGCCTGA Protein sequence : MTTAFTVVIPSRYASTRLPGKPLQMIGTKPMIQLVWEQACKSSAERVVVATDDPRIIEACKGFGAEAVLTREDHNSGTDR LAEVATQLGLAPDAIVVNVQGDEPLIPPSVIDQVAANLAAHGEARMATLAEPIENIETLFNPNVVKVVSDINGLALTFSR STLPWARDAFAKNRDVLPEGVPYRRHIGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWHGVRIHVGDALEAPPAGVD TQEDLERVRRLLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-36 | 43 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-36 | 43 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 9e-37 | 43 |
