Gene Information

Name : tpx (PflA506_2948)
Accession : YP_006324419.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.15
Position : 3281115 - 3281615 bp
Length : 501 bp
Strand : -
Note : identified by similarity to SP:P0A862; match to protein family HMM PF00578; match to protein family HMM PF08534

DNA sequence :
ATGGCTCAAGTCACCCTTAAAGGCAACCCGGTCCAGGTTGAAGGCCAATTGCCGAAAGTCGGCGCCAAAGCTGCAGACTT
CACCCTGACCGCCGGCGATCTGTCCAACGCCACCCTGGCTACCTTTGCCGGCAAGCGCAAAGTGCTGAACATCTTCCCAA
GCGTTGACACCCCAACCTGCGCCACTTCGGTGCGCAAGTTCAACGCCCAGGCCAACGATGTGGCCAACACCGTGGTGCTG
TGCATCTCCTCCGACCTGCCATTCGCCCAAGCGCGTTTCTGTGGTTCCGAAGGCCTGGAAAACGTTAAGAACCTGTCGGA
TTTCCGCAATGCCGACTTCGCCGTCGACTATGGTGTTTCCATCGCTGACGGCCCGCTGCAGGGCCTGACCGCTCGCGCTG
TCGTGGTGCTGGATGAAAACGACAACGTGCTGCACAGCGAGTTGGTCAAGGAAATCGCTGAAGAGCCAAACTACGACGCC
GCCCTGGCTGTGTTGAAGTAA

Protein sequence :
MAQVTLKGNPVQVEGQLPKVGAKAADFTLTAGDLSNATLATFAGKRKVLNIFPSVDTPTCATSVRKFNAQANDVANTVVL
CISSDLPFAQARFCGSEGLENVKNLSDFRNADFAVDYGVSIADGPLQGLTARAVVVLDENDNVLHSELVKEIAEEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 8e-36 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-36 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 6e-36 47
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 8e-36 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_006324419.1 thiol peroxidase VFG0087 Protein 2e-36 47