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Name : PflA506_0258 (PflA506_0258) Accession : YP_006321801.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : S1 RNA binding domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 301546 - 303870 bp Length : 2325 bp Strand : - Note : identified by match to protein family HMM PF00575; match to protein family HMM PF09371 DNA sequence : ATGGACAGCATCAACAGCCGCATCGCCGAGGAACTCGGTGTACGCCCACAACAGGTCGAAGCGGCCGTCGCTCTACTGGA TGAAGGCTCCACCGTGCCCTTCATCGCCCGTTACCGAAAAGAAGTAACCGGCAGCCTCGACGACACCCAACTGCGTCACC TGGAAGAGCGCCTGCGCTACCTGCGAGAACTCGACGAACGGCGTATCAGCATCCTCGCCAGCATCGAGGAACAGGGCAAG TTGACTCCTCAACTGGAACGCGACATCAAACTCGCGGATACCAAGACCCGCCTCGAAGACCTTTACCTGCCATACAAACA GAAACGTCGTACAAAGGGCCAGATCGCCCTGGAAGCCGGCCTGGGTGATTTGGCCGACGGCCTGTTCAACGACCCATCGC TGACCCCGGAAACCGAAGCCGCGCGCTTCATCGACGCGGAAAAAGGCGTCGCCGACGTCAAGGCCGCCCTCGAGGGCGCC AAGTACATCCTGATGGAGCGCTTTGCCGAAAACGCCAGCCTCCTGGAAAAACTGCGTACCTACCTCAAGCAAGAAGCCAT CCTCAGCGCCCGCGTTATCGCCGGCAAAGAGGAAGAAGGCGCCAAGTTCCGCGACTATTTCGAACATGACGAGCCGCTCA AAAGCATGCCGTCCCACCGCGCCCTGGCGATTTTCCGCGGCCGCAACGAAGGCATTCTCAGCTCCGCGTTGAAAGTCGGT GACGAGTTGCCGGGCACCATGCACCCGTGCGAAGGCATGATTGGTCAACAATTCGGCATCCAGAACCAGAACCGCCCGGC GGACAAGTGGCTCGGCGAAGTGGTGCGCTGGACCTGGAAGGTCAAGCTTTACACCCATCTGGAAACCGACCTGCTGGGCG AGCTGCGCGACGGCGCCGAAACCGAGGCGATCAACGTGTTCGCCCACAACCTGCACGATCTGCTGTTGGCCGCACCGGCC GGCCCGCGTGCCACCCTGGGCCTCGACCCGGGCCTGCGCACTGGTTGCAAGGTCGCGGTGGTCGACGCCACCGGCAAGCT GCTGGACCACGCCACCGTGTACCCACACGTACCGCACAACAAGTGGGACCAGACCCTCGCGATCCTGGCCGCCCTGTGCG CCAAGCATGCGGTGGACCTGATCGCCATCGGCAACGGCACCGCCAGCCGCGAAACCGACAAGCTGGCCGCCGAGCTGATC AAAAAATACCCAGCCATGAAGATGACCAAGGTCATGGTCTCCGAAGCAGGCGCTTCGGTGTACTCGGCGTCGGAGCTGGC CTCCAAGGAATTCCCGGACCTCGATGTGTCGATCCGTGGCGCGGTGTCCATCGCCCGTCGCCTGCAAGACCCGCTGGCCG AACTGGTGAAGATCGACCCTAAATCCATCGGCGTCGGCCAGTACCAGCACGACGTGTCGCAGCTGAAACTGGCACGCGGC CTGGATGCGGTGGTGGAAGACTGCGTAAACGCCGTGGGCGTGGATGTGAACACCGCGTCCGTCGCCCTGCTGGCGCGAAT CTCCGGCCTCAACGCGACCCTGGCGCAGAACATCGTCAGCCATCGCGACGAAAATGGCGCGTTCAAAACCCGTGCTGCAC TGAAAAAAGTCGCACGCCTGGGTGAAAAAACTTTTGAACAGGCTGCTGGTTTCTTACGCGTAATGAACGGTGACAACCCG CTGGACGCCTCTGCGGTTCACCCGGAAGCTTACCCATTGGTGCAACGCATTGCCGCCGAGACCGACCGCGATATCCGTTC GTTGATCGGTGATGCCGCGTTCCTCAAGCGCCTGGACCCCAAGAAGTACACCGACGAGACCTTCGGTGTGCCGACCATCA CCGATATCCTGCAAGAACTGGAGAAACCGGGTCGCGACCCGCGCCCGGAGTTCAAGACCGCCGAGTTCCAGGACGGCGTC GAAGACCTCAAGGACCTGCAACCGGGCATGATCCTCGAAGGCGTGGTGACTAACGTGACCAACTTCGGCGCATTCGTGGA CATCGGCGTGCATCAGGACGGCTTGGTGCACATCTCCGCGCTTTCGGAGAAGTTCATCAAGGACCCACGTGAGGCAGTCA AAGCTGGTGACGTGGTCAAGGTCAAGGTCATGGAAGTCGACATCCCGCGCAAACGCGTCGGCCTGTCGATGCGCATGAGC GACACCCCCGGGGAGAAAATCGACGGCGCACGTGGTGCTCGCCCCGGTTCGGCGCCGCGCCAGTCGCAGAACAACGCGCC GCGCAAGGAAACCGCGACTGCCGCGCCCAGCAACAACGCCATGGCGTCGCTGTTTGCCAACGCTAAACAGCTGAAGAAGC GTTGA Protein sequence : MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRISILASIEEQGK LTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGDLADGLFNDPSLTPETEAARFIDAEKGVADVKAALEGA KYILMERFAENASLLEKLRTYLKQEAILSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG DELPGTMHPCEGMIGQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAETEAINVFAHNLHDLLLAAPA GPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHNKWDQTLAILAALCAKHAVDLIAIGNGTASRETDKLAAELI KKYPAMKMTKVMVSEAGASVYSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDENGAFKTRAALKKVARLGEKTFEQAAGFLRVMNGDNP LDASAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDPKKYTDETFGVPTITDILQELEKPGRDPRPEFKTAEFQDGV EDLKDLQPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS DTPGEKIDGARGARPGSAPRQSQNNAPRKETATAAPSNNAMASLFANAKQLKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
