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Name : PflA506_2444 (PflA506_2444) Accession : YP_006323927.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2663570 - 2665171 bp Length : 1602 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF08352 DNA sequence : ATGAATCCGGACAATCTGATCGAAATCCGCGACCTCAGTGTCGAATTCGTCACCGGCGAGCACCACCACCGGGTGGTCAA CCACGTCAGCTTCGACATTAAGCGCGGCGAAACCCTGGCGCTGGTGGGTGAAAGCGGTTCGGGCAAATCGGTCACCGCCC ATTCGATCCTGCGCCTGCTGCCCTACCCGTTGGCCAGGCATCCGTCGGGCACTATCGAGTATTCAGGGCAAGACCTGCTG ACGCTTAAAGAGAAGACCCTGCGGCATATACGCGGCAATCGGATTGCGATGATCTTCCAGGAGCCGATGACCTCGTTGAA CCCGCTGCACTCCATCGAAAAACAGATCAACGAGGTGCTCGGCCTGCACAAGGGCCTGACCGGCAAGGTCGCCACCCAGC GCACGTTGGAATTGCTGGAGCTGGTGGGTATCCCCGAACCGCACAAACGCCTCAAGGCCCTGCCCCATGAGCTGTCCGGC GGCCAGCGCCAGCGGGTGATGATCGCCATGGCTCTGGCCAACGAGCCGGAGTTGTTGATTGCCGACGAGCCGACCACGGC GCTGGATGTCACCGTGCAGTTGAAGATCCTGGAATTGCTCAAGGAGCTGCAGGCGCGGCTGGGCATGGCGCTGCTGCTGA TCAGCCACGACCTCAACCTGGTACGGCGCATCGCCCATCGTGTGTGTGTGATGCAGCAAGGTTGCATCGTTGAACAGGCC GATTGCGAGACACTGTTCCAGTCGCCCCAGCATCCCTACACCCAGGAATTGCTCGCGGCGGAGCCCAGTGGTGGGCCAGC CAACAATGATGTCGGCCCTCCGCTGCTGGAAGTGGACGACCTGAAAGTCTGGTTTCCGATCAAGAAAGGCTTTTTGCGCA ATACCGTCGATTACGTCAAGGCTGTGGACGGCATCAACTTCAGCCTGCCCCAGGGCCAAACCCTGGGCATCGTTGGCGAA AGTGGCTCGGGCAAGTCCACCTTGGGCCTGGCAATTTTGCGCCTGATCGGCAGCCAGGGCGGGATTCGCTTCGAAGGCCA GCAACTGGACCGCCTCAGCCAACAGCAGGTGCGCCCGTTGCGCCGGGAAATGCAGGTGGTGTTCCAGGACCCGTTCGGCA GCCTGAGCCCGCGCATGTGCGTCAGCGAGATCGTTGGCGAAGGCCTGCGTATCCACAAGATGGGCACGCCCGCCGAACAG GAAGCGGCGATTATCGCGGCGCTCAAGGAAGTGGGCCTGGACCCCGAATCCCGGCATCGCTACCCCCATGAATTTTCCGG CGGCCAGCGCCAACGCATCGCTATCGCCCGAGCGCTGGTGCTCAAGCCGCGCCTGATCCTGCTGGACGAACCCACCTCGG CCCTGGACCGCACAGTACAGCGCCAGGTGGTAGAGTTGCTGCGCGGTTTGCAGGCCAAGTACAACCTGACCTACCTGTTT ATCAGCCATGACCTGGCAGTGGTGAAGGCGCTGAGTCACCAGTTGATGGTGGTCAAGCAAGGCCAGGTGGTGGAGCAAGG CGATGCCCAGGCTATTTTTGCTGACCCGCAACATGCCTATACCCGGCAGTTGCTCAAGGCGGCTTTTTTGGTGCCGGCCT GA Protein sequence : MNPDNLIEIRDLSVEFVTGEHHHRVVNHVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGTIEYSGQDLL TLKEKTLRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLHKGLTGKVATQRTLELLELVGIPEPHKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQQGCIVEQA DCETLFQSPQHPYTQELLAAEPSGGPANNDVGPPLLEVDDLKVWFPIKKGFLRNTVDYVKAVDGINFSLPQGQTLGIVGE SGSGKSTLGLAILRLIGSQGGIRFEGQQLDRLSQQQVRPLRREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMGTPAEQ EAAIIAALKEVGLDPESRHRYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRGLQAKYNLTYLF ISHDLAVVKALSHQLMVVKQGQVVEQGDAQAIFADPQHAYTRQLLKAAFLVPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-78 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-78 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-78 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-78 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-93 | 41 |
