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Name : PflA506_0225 (PflA506_0225) Accession : YP_006321768.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : sigma-54-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 263191 - 264117 bp Length : 927 bp Strand : + Note : identified by similarity to SP:P17899; match to protein family HMM PF00158 DNA sequence : ATGAGTCTGCATGAAACCTTCGGCCAGCCGCTGCTGACCTTTCCAGATGCTGAAAAAAGCCCGTTGAGCATCCGCGCCAA GGCGCTGGTGTTCGTCGACCCACGCTCACGCCAACTGCGTGAAGAGTTGGAAAGCCTTGCGCCGCGCGCCTTACCCGTAT TGATTCGAGGAGAAACCGGCAGCGGTAAAGAGTTGCTGGCGCGGCACATCCACCGTGGCAGTGACCGTACAGGCCTGTTT GTCTCGGTCAACTGTGGTGCCATCAGCCCCACCTATGCGGATGCCGAGTTGTTTGGCTATGCCGCCGGCAGTCACAGTGG CGCGGCGAGCAGCCGCGCGGGCTGGTTTGGCTCGGCCAATGGCGGCACCTTGTACCTGGATGAAATTGGTGATTTGCCGC TGCCGATCCAGGTGAAATTGCTCGCGGCCCTGGAAAACCACGAAGTCACCCGCGTCGGTGCCCACCAGCCCAGCCCGGTG GATGTGCGCCTGGTGGCCGCGACCAGCATCGACCTGGCCCAGGCCGTGGCCGTGGGCAAGTTTCATGAGCGTCTGTTCCA TTATTTGAGTGAGGGCCGGTTGGACCTGCCGGCGTTGCGCGAGCGGGTGGGGGATATCTTGTCTCTGGCCGAATATTTCC TCGGCATCTACAGCCAGCGCCTGGACCTTCCGGTGCCACTGATCAGCGACGCCGCCCAGCAGGTGCTGGAACACCACACG TGGCCGGGCAATACGCGAGAATTGGAAAACGTCATTCACTTTGCCTTGCTGGTGAGCAGCGGCGATGAAATCTTGCCCGA GCATTTGAACCTACCGACGGCAGGCTCACCGCTGGAGCAAGTACGACGAATTTTGGCCAGCGCCAGCCCGGCCGAGACGG AATCGGTGCGTAAATTCCTGTATGAACAAAATGGAATATCAACGTGA Protein sequence : MSLHETFGQPLLTFPDAEKSPLSIRAKALVFVDPRSRQLREELESLAPRALPVLIRGETGSGKELLARHIHRGSDRTGLF VSVNCGAISPTYADAELFGYAAGSHSGAASSRAGWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAHQPSPV DVRLVAATSIDLAQAVAVGKFHERLFHYLSEGRLDLPALRERVGDILSLAEYFLGIYSQRLDLPVPLISDAAQQVLEHHT WPGNTRELENVIHFALLVSSGDEILPEHLNLPTAGSPLEQVRRILASASPAETESVRKFLYEQNGIST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 2e-28 | 42 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 2e-28 | 42 |
| hrpS | ABQ88367.1 | HrpS | Virulence | Hrp PAI | Protein | 4e-33 | 41 |
| hrpS | AAA17650.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 4e-33 | 41 |
| hrpS | AAC35800.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 4e-30 | 41 |
