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Name : gabD (PflA506_0191) Accession : YP_006321734.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 224789 - 226231 bp Length : 1443 bp Strand : + Note : identified by similarity to SP:P25526; match to protein family HMM PF00171; match to protein family HMM TIGR01780 DNA sequence : ATGCAGCTTAAAGACACCCAGTTGTTCCGCCAGCAAGCCTTTATCGATGGCGCTTGGGTCGATGCGGACAATGGTCAAAC CATCAAGGTCAACAACCCGGCCACGGGCGAGATTCTCGGCACCGTGCCGAAGATGGGCGCCGCGGAAACCCGCCGCGCCA TCGAAGCCGCCGACAAGGCCCTGCCAGCCTGGCGTGCACTCACCGCCAAGGAGCGCGCCAACAAGCTGCGCCGCTGGTTC GAACTGCTGATCGAAAACCAGGACGACCTCGGCCGCCTGATGACCCTCGAACAAGGCAAGCCGCTGGCCGAAGCCAAGGG CGAAATCGTCTACGCCGCCTCGTTTATCGAGTGGTTCGCTGAAGAAGCCAAGCGCATCTATGGCGACGTGATCCCCGGCC ACCAGCCCGACAAGCGCCTGATCGTGATCAAGCAGCCCATCGGCGTGACCGCAGCCATCACCCCGTGGAACTTCCCTGCG GCGATGATCACCCGCAAAGCCGGCCCGGCCCTGGCCGCCGGTTGCACCATGGTGATCAAGCCGGCCTCGCAAACCCCGTT TTCGGCCCTGGCCCTGGTTGAGCTGGCGCACCGCGCCGGTATCCCCAAAGGCGTGCTCAGTGTGGTCACCGGCAGTGCTG GCGACATCGGCGGCGAGCTGACCAGCAACCCCATCGTGCGTAAATTGTCCTTCACCGGCTCGACCGAAATTGGTCGCCAG CTGATGGCCGAATGCGCCAAGGACATCAAGAAAGTCTCCCTGGAGCTGGGCGGTAACGCACCGTTCATCGTGTTCGACGA CGCCGACCTGGATAAGGCCGTCGAAGGCGCGATCATCTCCAAGTACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACC GCCTGTACATCCAGGATTCGGTGTACGACGCCTTCGCTGAGAAGCTCAAGGTGGCGGTGACCAAATTGAAGATCGGTAAC GGCCTGGAAGACGGCACCACCACCGGCCCGCTGATCGACGAAAAAGCCGTGGCCAAGGTGCAGGAACATATCGCTGATGC CCTGAGCAAAGGCGCCAAGCTGTTGGCCGGTGGCAAGGTGATGGAAGGCAACTTCTTCGAACCGACCATCCTGGTTGACG TGCCGAAAAACGCCGCCGTGGCCAAGGAAGAAACCTTCGGCCCGCTGGCGCCACTGTTCCGCTTCAAAGACGAAGCCGAA GTGATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCCTCCTACTTCTACGCCCGCGACCTGGGCCGGGTGTTCCGTGT GGCCGAGGCCCTGGAATACGGTATGGTCGGCGTCAACACCGGGTTGATCTCCAACGAAGTGGCGCCGTTCGGCGGCATCA AGGCCTCGGGCCTGGGCCGTGAAGGCTCCAAGTACGGGATCGAGGACTACCTGGAAATCAAATACCTCTGCCTGGGCATC TAA Protein sequence : MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKALPAWRALTAKERANKLRRWF ELLIENQDDLGRLMTLEQGKPLAEAKGEIVYAASFIEWFAEEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVIKPASQTPFSALALVELAHRAGIPKGVLSVVTGSAGDIGGELTSNPIVRKLSFTGSTEIGRQ LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDSVYDAFAEKLKVAVTKLKIGN GLEDGTTTGPLIDEKAVAKVQEHIADALSKGAKLLAGGKVMEGNFFEPTILVDVPKNAAVAKEETFGPLAPLFRFKDEAE VIAMSNDTEFGLASYFYARDLGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-160 | 67 |
