Gene Information

Name : PflA506_1746 (PflA506_1746)
Accession : YP_006323252.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Resistance
Product : efflux ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1916422 - 1917105 bp
Length : 684 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGGCGCAAGCATTCTCACCGCGCGAAACCTTAGCAAAGTGGTTCCCAGCGCGGAAGGTGAACTGACTATCCTGCACGA
ACTGAGCCTGGAACTGAACAAGGGCGATAGCCTGGCTATCGTCGGCAGCTCCGGTTCCGGTAAATCCACACTACTGGGCC
TGCTGGCCGGCCTCGACCTGCCCAGCAGCGGCGAAGTGACCCTGGCCGGGCAAGCCCTGAGCACCCTCGACGAAGATCAG
CGCGCGCGCATCCGTGCCGAGCATGTGGGTTTCGTATTCCAATCCTTCCAATTGCTCGACAGCTTGAATGCTCTGGAAAA
CGTGATGCTGCCGCTGGAGCTGGACGGTCGCCAGGACGCCCGCGAGCGAGCCAAACACCTGCTGGAGCGCGTAGGCCTGG
GCCAGCGCCTGACCCACTCGCCCCGCCAACTGTCCGGTGGCGAACAACAACGCGTGGCGATTGCCCGCGCGTTTGCCGCC
GAACCGGACGTGCTGTTTGCCGACGAGCCCACCGGCAACCTCGACAGCCATACTGGCGAGCGCATCAGCGACCTGTTGTT
CGAGTTGAATAAAGAGAGCGGTACGACCCTGGTACTGGTCACCCACGACGAGCGCCTGGCCCACCGTTGCCGGCGCCTGA
TCCGCCTTGAAGCCGGCCTGATGGTCGCGCCCCTGGAGCCTTGA

Protein sequence :
MGASILTARNLSKVVPSAEGELTILHELSLELNKGDSLAIVGSSGSGKSTLLGLLAGLDLPSSGEVTLAGQALSTLDEDQ
RARIRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRQDARERAKHLLERVGLGQRLTHSPRQLSGGEQQRVAIARAFAA
EPDVLFADEPTGNLDSHTGERISDLLFELNKESGTTLVLVTHDERLAHRCRRLIRLEAGLMVAPLEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-23 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-23 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-19 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PflA506_1746 YP_006323252.1 efflux ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 6e-31 46
PflA506_1746 YP_006323252.1 efflux ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 4e-32 45
PflA506_1746 YP_006323252.1 efflux ABC transporter, ATP-binding protein NC_012469.1.7686946. Protein 4e-20 41
PflA506_1746 YP_006323252.1 efflux ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 2e-25 41