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Name : kdpB (PflA506_1724) Accession : YP_006323230.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : - COG ID : - EC number : 3.6.3.12 Position : 1887064 - 1889121 bp Length : 2058 bp Strand : + Note : identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01497 DNA sequence : ATGAATATGCCTGCAAAAAACGCGGCCCCGGTCAAACCCCAGGAGCCTGCCAAAACCGCCATCTCGGCTCTCTGGCGCCC GGCGCTGGTCCAGGCGTTCGTCAAGCTCGATCCACGCCAACTGCAACGCTCGCCAGTGATGCTGGTGGTCGAACTGACCG CCATCCTCACCACCGTGTTGTGCTTCGTGCCCGATACCACCGTGCCCACCTTTGTTGCGGTGCAAATCGCGGTGTGGCTG TGGTTCACCGTGCTGTTCGCCAACTTCGCCGAAGCCCTGGCCGAAGGCCGTGGCAAGGCCCGCGCCGACAGCCTCAAGGC TGGCAGCGAAGGCTTGAGCGCCCGACGCCAGGAAGCCGATGGCAGCTTCAAGGTGGTGCCGGCCACCAGCCTGCGCAAGG GCGATGTGGTACGTGTTGCCGCCGGGGAAATGATCCCCGGTGACGGCGAGGTCGTCGAAGGGATTGCGGCGGTCAACGAA GCGGCGATTACCGGCGAATCCGCCCCGGTGATCCGCGAGTCTGGCGGCGACCGTTCGGCCGTCACCGGCAACACGCGGCT GGTGTCGGACTGGCTGCTCATCCGCATCACCGCCAACCCGGGCGAGTCCACCCTGGACCGTATGATCGCGCTGGTGGAAG GCGCCAAACGCCAGAAAACCCCCAACGAAGTTGCGCTGGATATTCTGCTGATCGGCCTGACCCTGATCTTTCTGCTGGTG GTGGTGACCCTGCAGCCGTTCGCCCACTTTGCCAATGGCAGCTTGCCGCTGGTGTTCCTGGTCGCACTGCTGGTGACGCT GATTCCCACCACCATTGGCGGCTTGTTGTCGGCCATCGGGATTGCCGGCATGGACCGCCTGGTGCGTCTCAACGTGATCG CCAAGTCTGGCCGCGCGGTAGAAGCGGCGGGGGATGTGCATGTGTTGCTACTGGACAAGACCGGCACCATCACCTTTGGT AACCGCCGTTGCTCGGCCGTGGTCGCAGCGCCTGGCGTCAGTGGCCGGGAATTGGCCGAAGGCGCGCTGCTGGCGTCCCT GGCGGATGACACGGCGGAAGGCAAGTCCATTGTTGAATACCTGCGCGCCTTGCACCCCCAGGCCGAGCCGAGCCTGGAGG CGTTGACCGCCGTGCCCTTCAGCGCCGAGACCCGTTTGTCCGGTGTCGACTATCAGGGCCGTGTGTTCCGTAAAGGCGCG GTGGACTCGCTGCTGACGTTTATCGGCCAGCAACGCAGCGACCTGCTGCCTGCGCTGTCGCGGGAAATCGACAAGATCGC CCAGAGCGGCGGCACGCCCTTGCTGGTGTGCGCCGATGGCAAGTTGCTGGGGGCGATCCATCTCAAGGACGTGGTCAAGC CCGGTATCCGCGAACGGTTTGCCGAGTTGCGCAAGCTGGGGATTCGTACCGTGATGGTCACAGGCGACAACCCGCTGACC GCCGCCGCGATTGCCGCTGAAGCGGGGGTGGACGATGTGCTGGCCGAAGCCACGCCAGAGAAGAAACTCGCGCGTATTCG CCATGAGCAGAACGATGGACGCCTGGTTGCCATGTGTGGCGATGGCGCCAACGATGCCCCGGCGCTGGCCCAGGCTGACG TCGGCATGGCGATGAACGACGGCACCCAGGCCGCGCGCGAAGCCGCCAACATGGTCGACCTCGACAGCGACCCGACCAAG CTGCTGGACGTGGTGCAGATCGGCAAGGAACTGCTGGTGACCCGTGGCGCGCTGACGACCTTTTCCATCGCCAACGACGT GGCCAAGTACTTCGCGATCCTGCCGGCGCTGTTCGCCTCGATCTACCCGCAACTGGGCGTGCTCAACATCATGCACTTGC AGAGCCCACAGAGCGCGATCCTCTCGGCCATCGTGTTCAATGCGCTGATTATCGTGGTGCTGATCCCATTGGCCCTGCGC GGTGTGCGCGTGCAGGCGGCGAGTGCGGCAGCGTTGTTGCGGCGCAATCTGCTGATCTACGGGCTGGGCGGGCTGTTGGT ACCGTTCGTGGGCATCAAGGCCATCGACATGCTACTGACCGCGCTGCACCTGGTTTGA Protein sequence : MNMPAKNAAPVKPQEPAKTAISALWRPALVQAFVKLDPRQLQRSPVMLVVELTAILTTVLCFVPDTTVPTFVAVQIAVWL WFTVLFANFAEALAEGRGKARADSLKAGSEGLSARRQEADGSFKVVPATSLRKGDVVRVAAGEMIPGDGEVVEGIAAVNE AAITGESAPVIRESGGDRSAVTGNTRLVSDWLLIRITANPGESTLDRMIALVEGAKRQKTPNEVALDILLIGLTLIFLLV VVTLQPFAHFANGSLPLVFLVALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIAKSGRAVEAAGDVHVLLLDKTGTITFG NRRCSAVVAAPGVSGRELAEGALLASLADDTAEGKSIVEYLRALHPQAEPSLEALTAVPFSAETRLSGVDYQGRVFRKGA VDSLLTFIGQQRSDLLPALSREIDKIAQSGGTPLLVCADGKLLGAIHLKDVVKPGIRERFAELRKLGIRTVMVTGDNPLT AAAIAAEAGVDDVLAEATPEKKLARIRHEQNDGRLVAMCGDGANDAPALAQADVGMAMNDGTQAAREAANMVDLDSDPTK LLDVVQIGKELLVTRGALTTFSIANDVAKYFAILPALFASIYPQLGVLNIMHLQSPQSAILSAIVFNALIIVVLIPLALR GVRVQAASAAALLRRNLLIYGLGGLLVPFVGIKAIDMLLTALHLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-147 | 59 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 4e-147 | 59 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-126 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-126 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-126 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 3e-126 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-126 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-126 | 54 |
