|
Name : kdpA (PflA506_1723) Accession : YP_006323229.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : K+-transporting ATPase, A subunit Function : - COG functional category : - COG ID : - EC number : 3.6.3.12 Position : 1885354 - 1887048 bp Length : 1695 bp Strand : + Note : identified by match to protein family HMM PF03814; match to protein family HMM TIGR00680 DNA sequence : ATGCACAGTTATGACTATTGGCTGATCATCGCCTTCTTTGCGGTGGTACTGGTGCCGGCACCGTTTCTGGGACGGTTCTA CTACAAGGTGATGGAAGGCCAGCGCACCTGGCTCACGCCCGTATTGGGGCCTGTCGAAAAGGCCTGTTATCGCCTCTCGG GCGTGGATGCGCAGCAGGAACAAAGCTGGCAGAAATACATGCTGGCCTTGCTCGCATTCAACCTTGCGGGCTTCTTGCTG TTGTTCTCGATCCTGTTATTCCAGGGCTCCCTGCCACTGAACCCACAGAAATTGCCCGGCCAGGAATGGACTCTGGCGTT CAACACCGCCGTCAGTTTCATGACCAATACCAACTGGCAGAACTACAGCGGTGAGGCGTCTCTCAGCTACCTGAGCCAGA TGGCCGGCCTGACCGTGCAGAACTTCGTCAGTGCAGCGACCGGTCTCGCCGTCCTGGTCGCCCTGTGCCGTGGGATCGGG CGCAAATCTGCCCAGACCCGGGGCAACTTCTGGGTCGACATGACCCGCGCCACCCTCTACGGCCTGCTGCCGTTGTGCAT GGTGCTCGCACTGTTTCTGGTATGGCAGGGCGTGCCGCAAACCTTCGCCCACTATGTTGATGCCGTCACGCTGCAGGGCG TGGACCAAGTGATTCCCTTGGGCCCGGCCGCCAGCCAGATTGCGATCAAGCAATTGGGCACCAACGGCGGTGGCTTCTTC GGCGTGAACTCGGCGCATCCGTTCGAAGACCCGACCGCCTGGGCCAACCTGTTTGAAGTGGCCTCGATCATTCTGATTCC GGTGGCACTGGTGTTTACCTTCGGCCACTACGTCAAGGATCTGCGTCAGAGCAGGGCGATCCTCGCGTGCATGCTGGCGC TGTTCTTGATCGGCGGCGCGACGTCGCTGTGGTCCGAATACCAGCCCAACCCAACCCTGAACAACCCGGCCGTAGAGCAA ACCGCCCCGCTGGAAGGCAAGGAAACACGTTTCGGCACAACCGGTACCGTGCTGTGGTCGGTGACCACTACTGCGGCCTC CAACGGTTCGGTCAACGGTATGCAGGACAGCCTCAGCCCTCTGAGTGGGATGGTGGCGCTGGTCAACATGATGGTCGGCG AAGTGATCTTCGGCGGTGTCGGTGCCGGTATGTACGGCATGTTGCTTAACGTGTTGATCGCGGTGTTCCTTGCCGGCTTG ATGATCGGCCGCACCCCGGAATACCTGGGCAAGAAACTCCAGGCCAGGGAAGTGCAATTGTTGGTGGTGACCCTGCTGGT GATGCCGGTTGGTGTGCTGGTGCTGAGTTCTATCGCTGCCAGCCTCCCGGGCCCGGCAGGCGCCATCAGTAACCCAGGCC CCCACGGCTTCAGTCAATTGCTGTACGCCTACACCTCTGCCAGTGCCAACAACGGTTCGGCGTTTGCTGGCCTCGGCGCC AACACCCCGTTCCATAACCTGATGCTGGGCCTGGGCATGTTGATCGGCCGCTTCGGCTACATCCTCCCGGTACTGGCCCT GGCCGGCAGCCTGGCGATGAAGAAAGCCGCGCCGATTGGCCAGAACAGCTTCCCCACCCATGGCGCGCTGTTCGTGACCT TGTTGACCGTGACCATTTTGTTGGTGGGCGGCCTGACTTTCCTGCCGACGCTGGCGTTGGGTCCCATCGCTGAACACTTG AGCATGGGCTTCTAG Protein sequence : MHSYDYWLIIAFFAVVLVPAPFLGRFYYKVMEGQRTWLTPVLGPVEKACYRLSGVDAQQEQSWQKYMLALLAFNLAGFLL LFSILLFQGSLPLNPQKLPGQEWTLAFNTAVSFMTNTNWQNYSGEASLSYLSQMAGLTVQNFVSAATGLAVLVALCRGIG RKSAQTRGNFWVDMTRATLYGLLPLCMVLALFLVWQGVPQTFAHYVDAVTLQGVDQVIPLGPAASQIAIKQLGTNGGGFF GVNSAHPFEDPTAWANLFEVASIILIPVALVFTFGHYVKDLRQSRAILACMLALFLIGGATSLWSEYQPNPTLNNPAVEQ TAPLEGKETRFGTTGTVLWSVTTTAASNGSVNGMQDSLSPLSGMVALVNMMVGEVIFGGVGAGMYGMLLNVLIAVFLAGL MIGRTPEYLGKKLQAREVQLLVVTLLVMPVGVLVLSSIAASLPGPAGAISNPGPHGFSQLLYAYTSASANNGSAFAGLGA NTPFHNLMLGLGMLIGRFGYILPVLALAGSLAMKKAAPIGQNSFPTHGALFVTLLTVTILLVGGLTFLPTLALGPIAEHL SMGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 8e-74 | 47 |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 1e-73 | 47 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 5e-65 | 43 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 5e-65 | 43 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 5e-65 | 43 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 5e-65 | 43 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 3e-66 | 43 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 3e-65 | 43 |
