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Name : wbpM (PflA506_1716) Accession : YP_006323222.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : nucleotide sugar epimerase/dehydratase WbpM Function : - COG functional category : - COG ID : - EC number : - Position : 1877884 - 1879878 bp Length : 1995 bp Strand : + Note : identified by similarity to GB:AAF72960.1; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993 DNA sequence : ATGGATAAGATACGTGCGTACCTGGTGGGATTGCCCCGACGACAAAAACGCGTCCTGCAACTGATAACTGACGTGTTAGT GGTCTGGTTTGCGTTATGGATGGCTTTTGTAGTACGTCTTGGCGTAGATGAGATGATCAATCCTGTCGCGATGCACTTAT GGCTGTTTATCTGCGCCCCGGTGGTTGCCATTCCCTTGTTTATCCGCTTTGGTATGTATCGTGCGGTGATGCGTTACTTC GGTAATGATGCGCTGATTGCGATTATCAAGGCTGTGAGCCTTTCGTCACTCATACTTGGTGTTGTTGTCTATTGGTACAG CAACCACCAAAATGTTGTCCCGCGCTCTATCATATTCAACTATTGGTGGCTAAGCCTCATCATGGTGGGCGGTCTGCGCT TGGGGATGCGTCAATATTTTCTGGGCGATTGGTTCGCCGCTGCACAACACGTGCCTTTCACCAATCGTGAGGATGGCTTG CCCCGTGTTGCTATCTACGGTGCTGGCGCAGCGGGTAATCAGTTGGTAGCAGCCCTGCGTATGGGTAGAGTGATGCGCCC GGTAGCATTCATCGACGACGACGCCAGTATCTCTGATCGTATTATTTCCGGTCTTCAGGTTTACAAGCCCAAACATATTC AGCGGATGATCGACGCCACAGGCGCTCAGGAAATTCTTTTGGCTATACCCTCGTCTAATCGTGGGCGTCGCCGGGAAATC CTCGGGTTTCTTGAAGGTTTCCCCCTGCATGTGCGCAGTGTCCCTGGCTTTATGGATTTGGCGAGCGGCAGGGTGAAGGT CGACGACATCCAGGAAGTTGATATCGCTGACCTTCTGGGCCGCGATGCCGTGCCTGCTCAAGACGAACTATTGGAGCATT GCATCAAAGGGCAGTGCGTTTTAGTGACCGGCGCTGGTGGTTCAATCGGCTCTGAGCTTTGTCGACAAATACTTGCTTTG CACCCTACGACACTGCTGTTGTTCGAACATAGTGAGTTCAACCTTTACAGCATTCTTTCCGAGCTTGAGCAACGTATTAT TCGTGAGTCCTTACCGGTTAAGCTGTTGCCAATCCTGGGGTCCATACGTAATCCGTCCAAGCTAATCGACGTCATGAGCA CTTGGCGGGTCGATACTGTGTATCACGCCGCTGCCTATAAGCATGTTCCGATGGTAGAACATAATATAGCCGAGGGAGTG TTCAATAATGTGATAGGTACGCTCAATACGGCGCAGGCTGCTTTACAGACTGGCGTTGCCAACTTTGTATTGATTTCAAC AGACAAGGCCGTACGTCCGACCAATATCATGGGTAGCACGAAACGGTTGGCTGAGTTGGTCTTGCAGGCACTGAGCCGTG AAGTCGCCCCCGTATTGTTCGGCGATAATGACTGTTTACCCAGAGTCAATAAAACGCGCTTTACCATGGTTCGTTTCGGT AACGTACTTGGTTCTTCGGGTTCTGTGATCCCGCTGTTCCATAGACAGATCAAGTCGGGTGGACCCTTGACGGTGACTCA CCCGAAGATTACCCGTTACTTCATGACAATCCCCGAAGCGGCGCAGTTGGTAATCCAAGCCGGCTCCATGGGCCATGGGG GAGATGTATTTGTGCTGGATATGGGAGAGCCCGTAAGAATCATCGAGCTGGCTGAGAAGATGATTCACTTGTCTGGTCTG AGTGTGCGCTCTGAGAAGAATCCTCATGGCGACATTGCCATCGAGTTTTCCGGCTTGCGTCCCGGCGAAAAACTGTATGA AGAGTTGCTGATCGGTGACAACGTAGTGGCTACCCAGCACCCGATGATCATGAGCGCTGATGAAGATAATCTCGCTTGGG ATGTGCTCAAGGTCAAGTTGACGGAGTTGCTTTCTGCTTTGGACCAGGATGATTACACGCGTGTTCGGCAATTGCTGCGC GATACTGTCAGCGGCTATGCACCAGATGGCGAAATAGTTGATTGGATCTACCAGCAGCGTCGTCTTGAGCCTTAA Protein sequence : MDKIRAYLVGLPRRQKRVLQLITDVLVVWFALWMAFVVRLGVDEMINPVAMHLWLFICAPVVAIPLFIRFGMYRAVMRYF GNDALIAIIKAVSLSSLILGVVVYWYSNHQNVVPRSIIFNYWWLSLIMVGGLRLGMRQYFLGDWFAAAQHVPFTNREDGL PRVAIYGAGAAGNQLVAALRMGRVMRPVAFIDDDASISDRIISGLQVYKPKHIQRMIDATGAQEILLAIPSSNRGRRREI LGFLEGFPLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDAVPAQDELLEHCIKGQCVLVTGAGGSIGSELCRQILAL HPTTLLLFEHSEFNLYSILSELEQRIIRESLPVKLLPILGSIRNPSKLIDVMSTWRVDTVYHAAAYKHVPMVEHNIAEGV FNNVIGTLNTAQAALQTGVANFVLISTDKAVRPTNIMGSTKRLAELVLQALSREVAPVLFGDNDCLPRVNKTRFTMVRFG NVLGSSGSVIPLFHRQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGHGGDVFVLDMGEPVRIIELAEKMIHLSGL SVRSEKNPHGDIAIEFSGLRPGEKLYEELLIGDNVVATQHPMIMSADEDNLAWDVLKVKLTELLSALDQDDYTRVRQLLR DTVSGYAPDGEIVDWIYQQRRLEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-71 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpM | YP_006323222.1 | nucleotide sugar epimerase/dehydratase WbpM | VFG0029 | Protein | 1e-117 | 45 |
