Gene Information

Name : pip (PflA506_1682)
Accession : YP_006323188.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : proline imino peptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1839433 - 1840365 bp
Length : 933 bp
Strand : -
Note : identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250

DNA sequence :
ATGGAATTCATCGAAAAAGTTCGCGAAGGCTACGCGCCCTTTGGCGCCTATCAGACCTGGTATCGCGTCACGGGCGACCT
GAGCACAGGCCGCACGCCCTTGGTGATCATCCATGGCGGCCCGGGCTGCACCCACGATTACGTCGACGCCTTCAAGGACG
TCGCCGCCAGCGGCCACGCAGTCATCCATTACGACCAGTTGGGCAACGGCCGCTCCACGCATTTGCCGGAAAAAGATCCG
TCGTTCTGGACCATCGGCCTGTTCCTCGACGAGTTGAACAACCTGCTGGACCACCTGCAAATCAGTGAGAACTACGCGAT
CCTGGGGCAATCTTGGGGCGGCATGCTCGGCAGCGAACACGCGATCTTGCAACCCAAAGGCCTGCGCGCGTTTATCCCTG
CCAACTCGCCCACCTGCATGCGCACCTGGGTCAGCGAAGCCAATCGCCTGCGCAAGCTGTTGCCTGAAGGCGTGCACGAA
ACCCTGCTCAAGCACGAGCAGGCCGGCAGCTACCAAGACCCGCAATACCTGGCGGCCTCACGAATTTTCTATGACCAGCA
TGTGTGCCGGGTCAACCCATGGCCCGAAGAAGTGGCACGCACCTTCGCCCAGGTAGATGCCGACCCGACGGTGTACCACG
CCATGAGCGGCCCGACTGAGTTCCATGTGATCGGCAGCTTGAAGGACTGGAACGTGATTGGCCGCCTGTCAGCCATCAAG
GTGCCGACCCTGGTGATTTCCGGTCGACATGACGAAGCTACACCGTTGGTGGTCAAGCCGTTCCTGGATGAGATAGCGGA
CGTGCGCTGGGCACTGTTTGAAGACTCCAGCCACATGCCCCATGTGGAAGAACGCCAGGCATGCATGGGGACGGTGGTGA
AGTTTCTGGATGAGGCGTGTTCGTTGCCCTGCAAAGAACTAAAAGCGGGTTGA

Protein sequence :
MEFIEKVREGYAPFGAYQTWYRVTGDLSTGRTPLVIIHGGPGCTHDYVDAFKDVAASGHAVIHYDQLGNGRSTHLPEKDP
SFWTIGLFLDELNNLLDHLQISENYAILGQSWGGMLGSEHAILQPKGLRAFIPANSPTCMRTWVSEANRLRKLLPEGVHE
TLLKHEQAGSYQDPQYLAASRIFYDQHVCRVNPWPEEVARTFAQVDADPTVYHAMSGPTEFHVIGSLKDWNVIGRLSAIK
VPTLVISGRHDEATPLVVKPFLDEIADVRWALFEDSSHMPHVEERQACMGTVVKFLDEACSLPCKELKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf32 NP_460345.1 proline iminopeptidase Not tested SPI-2 Protein 8e-49 43
pip YP_216388.1 hydrolase or acyltransferase Not tested SPI-2 Protein 3e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pip YP_006323188.1 proline imino peptidase VFG0481 Protein 3e-49 43