|
Name : PflA506_1643 (PflA506_1643) Accession : YP_006323150.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : terminase, ATPase subunit, gpP-related protein Function : - COG functional category : - COG ID : - EC number : - Position : 1798701 - 1800458 bp Length : 1758 bp Strand : + Note : identified by match to protein family HMM PF03237; match to protein family HMM PF06056 DNA sequence : ATGACTACGACCGAATTGCTCCCCATCGATCCCAGACGCCAATCCAAGTTCCTCTATTGGATGGGTTGGCGTATCTGCGA GATTGCCGAGGCTACGGGCGAAAAGGAAAAAACGCTACACAGCTGGAAGGCTCGCGACGAGTGGGACCGGGCCGATAATG TTGAGCGGATCGGCGGCGCGCTGGAAGCGCGGTTGGTGCAACTGATCCTCAAGGAAGGCAAGAGCGGCGGCGACTTCAAG GAAATTGACCTGCTGCACCGCCAGCTGGAGCGCCAGGCGCGCATTCAGCGTTTCCAGGGCGGCGGAACCGAAACCGAACT CAACCCCAACCTTGCCAAGCGCAACGAAGGGCCGAAGAAAAAGACGCCGAAAAACGACATCAGCGAAGACCAGATCGAGC TGCTGCGCGAAGCGTTCATCGATGGGTGTTTCGACTACCAAAAAGATTGGTACCGGGCGGGAAACCAGCGCACTCGCGTC ATCCTCAAAAGCCGGCAGATAGGCGCCACTTACTACTTTGCCCGCGAGGCGTTCATTGATGCGCTGGAGACCGGGCGCAA TCAGATATTCCTGTCGGCCTCGAAGAACCAGGCTTATCTGTTTCGGGGATACATCCAGGCGTTTGCCCGTGAGGTCATTG GTGTTGAGCTGACCGGCGATCCCATCGTCTTGCCCAATGGCGCCGAGCTGTTTTTTCTCGGTACGAATGCGCGCACCGCC CAGGGCTACCACGGCAATTTCTACTTCGATGAGTTCTTCTGGACGTTCAAATTTGAGGAGCTGAACAAGGTCGCCTCCGG CATGGCGATGCACAAGAAGTGGCGCAAAACCTACTTCTCGACGCCGTCGACCATGGCCCACGAAGCCTATACGTTCTGGA CTGGCGAACGCTTCAACAAAGGCAAGCCAGCGGCGCAACACACCAAGGTCGATGTTTCCCATGGCGCGCTCCAGCAAGGG CGATTCTGCGAGGACCGGTTGTGGCGCCAAATCGTCACCATTCTCGACGCGGAGCAGGGCGGTTGCGACCTGTTCGACAT TGAGGAGTTGCGCCGCGAGTACAGCCCAGAGGCGTTTGCAAACCTGCTGATGTGCGAGTTTGTCGACGATGGCGCGAGCA TCTTTCCGCTGACGGTGCTGCAGCCGTGCATGGTCGACAGCTGGGTTGAGTGGGCCGAGGACTACAAGCCGTTTGCCATG CGTCCATTCGGGGATCGCCAGGTGTGGGTGGGCTATGACCCTGCGGAAACCGGTGACTGCTCCGGCCTGGTGGTGGTTGC GCCGCCGCTGGTTCCGGGCGGCAAGTTCCGGGTGCTGGAACGTCACCAATTCCGTGGGATGGACTTCGCGGCGCAGGCCA GCGTGATTAAAGCCGTCTGCGACCGCTACTGGGTGACGTACATCGGGATCGACGTCACCGGCCTGGGCAGCGGCGTGGCG CAGCTGGTGCGCCAATTCTTCCCCAATGTCACCACGTTCAGCTATTCGCCCGAGGTCAAGACGCGCCTGGTGCTGAAGGC TTACGACGTGATCCACCGGGGCCGGCTGGAATTCGACGCCGGGTGGACCGACATGGCGCAGTCGCTGATGGCGATCCGCA AGACCATCACCGCAGGCGGTCGCCAATTCACCTACACCGCCGGCCGCAACGACAACACCGGTCACGCCGACTTGGCGTGG GCGCTCTTTCACGCATTGCATAACGAACCGCTGGAGGGGCAGACCACTGCCAACACCGGGCGGATGGAGATTTTTTGA Protein sequence : MTTTELLPIDPRRQSKFLYWMGWRICEIAEATGEKEKTLHSWKARDEWDRADNVERIGGALEARLVQLILKEGKSGGDFK EIDLLHRQLERQARIQRFQGGGTETELNPNLAKRNEGPKKKTPKNDISEDQIELLREAFIDGCFDYQKDWYRAGNQRTRV ILKSRQIGATYYFAREAFIDALETGRNQIFLSASKNQAYLFRGYIQAFAREVIGVELTGDPIVLPNGAELFFLGTNARTA QGYHGNFYFDEFFWTFKFEELNKVASGMAMHKKWRKTYFSTPSTMAHEAYTFWTGERFNKGKPAAQHTKVDVSHGALQQG RFCEDRLWRQIVTILDAEQGGCDLFDIEELRREYSPEAFANLLMCEFVDDGASIFPLTVLQPCMVDSWVEWAEDYKPFAM RPFGDRQVWVGYDPAETGDCSGLVVVAPPLVPGGKFRVLERHQFRGMDFAAQASVIKAVCDRYWVTYIGIDVTGLGSGVA QLVRQFFPNVTTFSYSPEVKTRLVLKAYDVIHRGRLEFDAGWTDMAQSLMAIRKTITAGGRQFTYTAGRNDNTGHADLAW ALFHALHNEPLEGQTTANTGRMEIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13464.1 | predicted ATPase terminase subunit | Not tested | PAGI-6 | Protein | 0.0 | 84 |
| t4322 | NP_807916.1 | terminase subunit | Not tested | SPI-7 | Protein | 4e-163 | 60 |
| STY4627 | NP_458709.1 | probable terminase subunit | Not tested | SPI-7 | Protein | 2e-163 | 60 |
