Gene Information

Name : PflA506_1641 (PflA506_1641)
Accession : YP_006323148.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Unknown
Product : phage major capsid protein, P2 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1796652 - 1797674 bp
Length : 1023 bp
Strand : -
Note : identified by match to protein family HMM PF05125; match to protein family HMM TIGR01551

DNA sequence :
ATGCGTAACGACACTCGAAAACTCTTCACTGGCTACCTCGCCCAGGTGGCACAGATCAACGGCGTGGAATCGGCCACCGC
CACGTTCAGCGTGGACCCGACTATTCAGCAGCGCCTGGAAACCAAGATTCAGGAATCCAGCGAGTTCCTGACCAAAGTCA
ACGTCATCGGCGTCGACGAACAGGAAGGCGAAAAGGTCGGCTTAGGCGTCGGCGGCACCGTTGCCAGCCGCACCAACACC
AAGGTCAAGAAGCGTGAGCCAAGCAGTATTGGCACCCTGTCCAGCGACAAGTACCGAGCTGAGCAGACCGACTTTGACAC
CTACGTCAGTTACAAGCAGCTCGACGCTTGGGCGAAGTTCCCGGACTTCCAGACTCGCCTGGCCAGCGCAATTGCCCAAC
GTCAGGCGCTCGACCGTATCCAAATCGGTTTCTACGGTACTTCGGCCGCTGAACAAACCGACCGCACCGCGCACCCGTTG
CTGGAAGACGTCAACATCGGTTGGCTCCAGCAATACCGCACTCACGCGCCTGACCGCGTGCTGAAAGAAGGCGCCGTCGC
CGGCAAGATCACCATCGGTAAAACCGGCGACTTCAAAAACATCGACGCCCTGGTCTATGACGCCATTCAGTTGCTCGACC
CTTGGTATCGCCGTAACCCCGGTTTGGTGGTACTGACAGGCCGAGAGTTGGTGCACGACAAGTTCCTGGCCTTGGTCAAC
AAGGACCAAGACGCGACCAATACCCTGGCGAGCGACCTGATCATCTCGCAGCGCCGCGTCGGTGGCCTACCGCTGTACGA
GGTTCCTTACATCCCTGAAGGCACCATCCTCATCACCACGTTCGCCAACCTGTCGGTGTACTGGCAGATCGGTGGGCGCC
GCCGCTACCTCAAGGAAGAGCCGGAGTGGAACCGTGTCAGCAACTTCGAATCGTCGAACGAGGCTTACGTGGTTGAGGAA
TACGGCTTGGGTTGCCTGCTGGAAAACATCACCCCAGTCGAAGAAGCCGGCAGCGAGGGTTAA

Protein sequence :
MRNDTRKLFTGYLAQVAQINGVESATATFSVDPTIQQRLETKIQESSEFLTKVNVIGVDEQEGEKVGLGVGGTVASRTNT
KVKKREPSSIGTLSSDKYRAEQTDFDTYVSYKQLDAWAKFPDFQTRLASAIAQRQALDRIQIGFYGTSAAEQTDRTAHPL
LEDVNIGWLQQYRTHAPDRVLKEGAVAGKITIGKTGDFKNIDALVYDAIQLLDPWYRRNPGLVVLTGRELVHDKFLALVN
KDQDATNTLASDLIISQRRVGGLPLYEVPYIPEGTILITTFANLSVYWQIGGRRRYLKEEPEWNRVSNFESSNEAYVVEE
YGLGCLLENITPVEEAGSEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 4e-101 62
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 1e-74 47
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 1e-74 47