Gene Information

Name : PflA506_1623 (PflA506_1623)
Accession : YP_006323130.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Unknown
Product : phage tail sheath protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1784864 - 1786033 bp
Length : 1170 bp
Strand : -
Note : identified by match to protein family HMM PF04984

DNA sequence :
ATGGCCGATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACTATTCCCACCGCAGT
TATCGGCATGGTTTGCACGGCTGAAGATGCGGACCCACTCGTTTTCCCTCTGGACACGCCCGTCCTGATCACCAACGTGC
AGACCGCCGTCGGCAAAGCCGGTGTAAAGGGCACCCTGGCCGCGAGCCTGCAAGGCATCGCCGACCAGACCAAGCCCTAC
GTCATCGTGGTGCGGGTCAAGGAAGGCGCCGACGAAGCGGCCACCACCAGCGCCCTGATCGGCGGCACTACTCCGACGGG
CCAGTACACCGGCATGAAAGCCCTGCTCGCCGCCAAGTCCCGCGTGGGCATGGCACCGCGCATTCTCGGCGTGCCTGGCC
TGGACAGTTTGCCGGTGGCCACCGCACTCGGTGCCATTGCCAAAGACCTTCGCGCCTTCGCCTACGTCAGCGCCTGGGGC
TGCAAAACCAAGGAAGAGGTGGTCGCTTACCGCGCGAACTTCGGCGCCCGCGAGATGATGGTGATCTGGCCGGACTTCCA
GAACTGGGACACCGTCGCCAACAAGACCACCACCGCCTCGGCAGTGGCCCGTGCGCTGGGCCTGCGCGCCAAGATCGATC
AGGAGACAGGTTGGCACAAGACCCTGTCCAACGTGGCCGTCAGCGGCGTCACCGGTATCAGCGCCGACGTGTTCTGGGAT
CTGCAAAACCCGGCCACCGACGCCAACTACCTCAACAGCAACGACGTCACCACCCTGATTAACGCCAACGGCTTCCGCTT
CTGGGGTAGCCGCACCTGCAGCGATGACCCGCTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCGGACA
CCATGGGCGAAGCGCACATGTGGGCCGTTGACCGCCCTATGCACGCCTCCCTGGTGCGCGACCTGGTCGAAGGGGTGAAC
GCCAAGATGCGCGAGATGAAATCCCAGGGCTACCTGATCGGCGGCAGCTGCTGGTACCCGGACGACATCAATACCAAAGA
CACCCTCAAGGCCGGCAAGCTCTGGGTTGATTACGACTACACCCCCGTGCCGCCCCTTGAAGACCTCACCTTCCGCCAGC
GAATCACCGACCGTTACCTGATCGACTTCGCCAAGGGCATCAACAGCTAA

Protein sequence :
MADYLHGVRVIELNDGTRPIRTIPTAVIGMVCTAEDADPLVFPLDTPVLITNVQTAVGKAGVKGTLAASLQGIADQTKPY
VIVVRVKEGADEAATTSALIGGTTPTGQYTGMKALLAAKSRVGMAPRILGVPGLDSLPVATALGAIAKDLRAFAYVSAWG
CKTKEEVVAYRANFGAREMMVIWPDFQNWDTVANKTTTASAVARALGLRAKIDQETGWHKTLSNVAVSGVTGISADVFWD
LQNPATDANYLNSNDVTTLINANGFRFWGSRTCSDDPLFAFENYTRTAQILADTMGEAHMWAVDRPMHASLVRDLVEGVN
AKMREMKSQGYLIGGSCWYPDDINTKDTLKAGKLWVDYDYTPVPPLEDLTFRQRITDRYLIDFAKGINS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 6e-137 74
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 8e-128 68
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 8e-128 68