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Name : lysS (PflA506_1192) Accession : YP_006322712.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1351029 - 1352531 bp Length : 1503 bp Strand : + Note : identified by similarity to SP:P14825; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 DNA sequence : ATGAGCGACCAACAACTCGACCCGCAAGCCCTGCAACAGGAAGAAAACTCCCTGATCGCCCTGCGCAAGGAAAAGCTTGC TGCCGAGCGCGCCAAGGGTAACGCCTTCCCCAACGACTTCCGTCGCGACAACTACTGCGATGCCTTGCAGAAGCAATACG CGGACAAGACCAAGGAAGAACTGGCAGAGGCTGCGATCCCGGTCAAGGTGGCAGGTCGCATCATGCTCAACCGTGGCTCG TTCATGGTGATCCAGGACATGACCGGTCGCATCCAGGTCTACGTCAACCGCAAGACCCTGTCCGAAGAAACCCTGGCCTC GGTGAAAACCTGGGACATGGGCGACATCATCGCAGCCGAAGGCACCCTGGCCCGTTCCGGCAAGGGCGACCTGTACGTCG AGATGACCAATGTGCGCCTGCTGACCAAGTCCCTGCGCCCGCTGCCAGACAAACACCACGGCCTGACCGACACCGAACAG CGCTATCGCCAGCGCTACGTTGACCTGATCGTCAACGAAGACGTGCGCCAGACCTTCCGCGTACGCTCGCAAGTCATTGC TCACATCCGCAGCTTCCTGATGCAGCGTGACTTTCTGGAAGTGGAAACCCCGATGCTGCAGACCATCCCGGGTGGTGCCG CAGCCAAACCGTTCGAAACCCACCACAACGCGCTGGACATGGAAATGTTCCTGCGTATCGCGCCGGAGCTGTACCTCAAG CGCTTGGTGGTGGGCGGCTTTGAAAAGGTGTTCGAGATCAACCGCAACTTCCGTAACGAAGGCGTCTCGACCCGTCACAA CCCTGAATTCACCATGTTGGAGTTCTACCAGGCCTACGCCGACTACGAAGACAACATGGACCTGACCGAAGAACTGTTCC GCGAGCTGGCACAGCTGGTGCTGGGCAGCACTGACGTGCCGTACGGCGACAAGGTGTTCCACTTCGGCGAGCCATTCGTG CGCCTGTCGGTGTTCGACTCGATCCTCAAGTACAACCCCGAGCTGACCGCTGACGACCTCAACGACATCGACAAGGCCCG TGCCATTGCCAAGAAAGCCGGCGCCAAGGTGCTGGGCTTCGAAGGCCTGGGCAAGCTGCAGGTGATGATTTTCGAAGAAC TGGTGGAGCACAAGCTGGAGCAGCCGCACTTCATTACCCAGTACCCGTTCGAAGTGTCGCCGCTGGCCCGTCGCAACGAC GACAACCCCAACGTCACCGACCGTTTCGAGCTGTTCATCGGTGGCCGCGAAATCGCCAACGCCTACTCCGAGCTTAACGA CGCGGAAGACCAGGCCGAGCGTTTCATGGCCCAGGTGGCCGACAAGGACGCCGGTGATGACGAAGCCATGCACTACGATG CCGACTTCGTTCGGGCCCTGGAGTACGGCATGCCGCCGACTGCCGGTGAAGGTATCGGCATTGACCGTCTGGTGATGTTG TTGACCAACTCGCCGTCGATCCGCGACGTGATCCTGTTCCCGCACATGCGGCCGCAAGCGTAA Protein sequence : MSDQQLDPQALQQEENSLIALRKEKLAAERAKGNAFPNDFRRDNYCDALQKQYADKTKEELAEAAIPVKVAGRIMLNRGS FMVIQDMTGRIQVYVNRKTLSEETLASVKTWDMGDIIAAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV RLSVFDSILKYNPELTADDLNDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRND DNPNVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-134 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-77 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006322712.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-134 | 60 |
