Gene Information

Name : rpmE_2 (PflA506_1079)
Accession : YP_006322600.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L31
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1237430 - 1237702 bp
Length : 273 bp
Strand : +
Note : identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105

DNA sequence :
ATGAAAGCTGGTATCCACCCCGACTACCGCACCGTGCTGTTCCACGACACTGCCGCCGACGTGTTCTTCCTCATCGGTTC
CACCGCCGACAGTGATCGCACCCATAAGCACAGCGACGGCAACACCTATCCCTACATCCCGCTGGACGTCTCCAGCGCCT
CGCACCCGGTCTACACCGGTCAGCAGCGCAAGACCCAGGCCGAAGGCCGGATTGCCGGGTTCAACAAGCGTTTTGCATCG
TTTGGGTCGAGCCCGAAAAAAGCTGACGCATGA

Protein sequence :
MKAGIHPDYRTVLFHDTAADVFFLIGSTADSDRTHKHSDGNTYPYIPLDVSSASHPVYTGQQRKTQAEGRIAGFNKRFAS
FGSSPKKADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmE2 NP_286687.1 50S ribosomal protein L31 Not tested TAI Protein 1e-17 54
rpmE2 NP_287095.1 50S ribosomal protein L31 Not tested TAI Protein 1e-17 54