|
Name : clpB (EBL_c09700) Accession : YP_006318596.1 Strain : Escherichia blattae DSM 4481 Genome accession: NC_017910 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 988266 - 990842 bp Length : 2577 bp Strand : + Note : - DNA sequence : ATGCGCCTGGATCGTCTTACTAATAAGTTCCAGCAAGCACTCGCCGATGCCCAGTCCCTCGCTCTCGGGCACGACAACCA ATATATCGAACCTCTTCACCTGATGAGCGCTCTGCTCAGCCAGGAAGGGGGATCTGTTGCCCCGTTACTTACCACTGCCG GCGTGAATGTCGGGCAGTTACGTACCGCTATTGATGAAGCGCTGAAGCGCCTGCCCCAGGTTGAAGGGACCGGTGGTGAT GTTCAGCCGTCTCAGGATCTGGTGCGAGCCTTAAATCTGTGCGACAAGCTGGCACAGAAACAGGGTGACAATTTTATTTC ATCAGAGCTGTTTGTTCTGGCGGCGCTTGAGACCCGCGGGTCCCTGGCCGATTTACTGAAAAATGCCGGACTGACGACAG CCAACGTAACGCAGGCCATTGAGCAACTGCGTGGAGGCGAAAGCGTGAATGATCAGAATGCCGAGGATCAACGGCAGGCA TTGAAAAAATTTACCGTGGATCTGACCGAGCGGGCCGAGCAGGGCAAGCTGGATCCCGTTATCGGGCGTGATGAAGAGAT CCGCCGCACTATTCAGGTACTGCAGCGCCGGACCAAAAACAACCCGGTACTGATTGGTGAGCCTGGCGTGGGTAAAACCG CCATTGTGGAAGGGCTGGCCCAGCGTATTGTTAATGGCGAAGTGCCGGAAGGGCTGAAAGGCCGCCGGGTACTGGCGCTG GATATGGGGGCGCTGGTGGCCGGGGCGAAATACCGCGGTGAATTCGAAGAGCGCCTCAAAGGGGTGCTTAACGATCTGGC CAAACAGGAAGGCAATGTCATCCTGTTTATTGACGAGCTGCACACTATGGTGGGGGCAGGTAAAGCAGACGGCGCCATGG ATGCCGGGAATATGCTGAAACCGGCGCTGGCCCGTGGTGAGCTGCACTGCGTGGGTGCCACCACACTGGATGAGTATCGA CAGTATATTGAAAAAGACGCCGCCCTGGAGCGTCGTTTCCAGAAAGTATTTGTGGCGGAGCCGAGCGTTGAAGATACCAT CGCGATTCTGCGTGGCCTGAAAGAGCGCTATGAATTGCACCACCATGTGCAAATCACGGACCCGGCAATCGTGGCGGCGG CAACGTTGTCCCACCGCTATATTGCTGACCGGCAGTTGCCGGATAAAGCCATCGACCTTATCGATGAAGCGGCGTCCAGC ATCCGTATGCAGATAGACTCCAAACCCGAAGAGCTCGATCGTCTGGACCGGCGTATTATCCAGTTAAAACTGGAGCAGCA GGCCCTGCGTAAAGAAGCAGACGAAGCCAGTAAAAAACGGCTGGATATGCTGGAAGAAGAGCTCGCCGATAAAGAGCGCC AGTATTCCGTGCTGGAAGAAGAGTGGAAAGCGGAAAAAGCCTCGCTGTCCGGTACACAGACTATCAAAGCGGAGCTGGAG CAGGCGAAGATTGCCATTGAGCAGGCGCGCCGTAACGGCGACCTGGCCCGCATGTCTGAGCTGCAATACGGGAAAATCCC TGAACTGGAAAAACAGCTGGCGGCGGCCACCCAGTCTGAAGGGAAAACCATGCGTCTGCTGCGTAACAAAGTGACCGACG CGGAAATTGCGGAAGTGCTGGCTCGCTGGACCGGTATTCCGGTCTCCAGAATGATGGAGAGCGAGCGCGATAAACTGCTG CGTATGGAAGAGCAACTGCACGATCGTGTTATCGGCCAGAATGAAGCAGTTGAAGCGGTATCTAACGCGATTCGCCGTAG CCGTGCGGGCCTTGCGGATCCTAACCGGCCGATTGGCTCCTTCCTGTTCCTTGGGCCGACCGGGGTTGGTAAGACCGAAT TGTGTAAGGCGCTGGCTAACTTTATGTTCGACAGCGACGACGCGATGATCCGTATCGACATGTCCGAGTTTATGGAGAAA CACTCGGTATCGCGTCTGGTGGGGGCACCTCCGGGATATGTGGGTTATGAAGAAGGGGGCTACCTCACGGAAGCCGTGCG GCGGCGTCCTTATTCCGTCATCCTGCTGGATGAAGTGGAAAAAGCGCACCCGGATGTCTTTAATATCCTGCTGCAGGTGC TGGATGACGGGCGCCTGACAGACGGGCAGGGGAGAACGGTCGACTTTCGCAATACGGTCGTGATTATGACCTCTAACCTG GGGTCTGATCTTATTCAGGAGCGTTTTGGCGAGCTTAACTATGGCAGCATGAAAGACCTGGTTCTGGAGGTTGTCAGCCA TAATTTCCGCCCGGAATTCATTAACCGTATTGATGAAGTGGTGGTATTCCACCCGCTGGGCCAGCAGCATATTGCTTCTA TTGCCCAGATCCAGCTGCAGCGGTTGTACAAACGCCTGGAAGAGCGCGGCTACAGCGTGCATATCTCTGCCGAGGCGCTC AACCTGCTGAGTGAAAATGGCTTTGATCCGGTATATGGCGCGCGTCCGCTGAAACGCGCTATCCAGCAGCAGATTGAAAA CCCGCTGGCTCAGCAGATCCTGTCTGGTGAACTGGTGCCGGGGAAAACCATCGAGCTGGTGGACAAAGACGGCACGATTG TGGCGACCCAGTCATAA Protein sequence : MRLDRLTNKFQQALADAQSLALGHDNQYIEPLHLMSALLSQEGGSVAPLLTTAGVNVGQLRTAIDEALKRLPQVEGTGGD VQPSQDLVRALNLCDKLAQKQGDNFISSELFVLAALETRGSLADLLKNAGLTTANVTQAIEQLRGGESVNDQNAEDQRQA LKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLAL DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS IRMQIDSKPEELDRLDRRIIQLKLEQQALRKEADEASKKRLDMLEEELADKERQYSVLEEEWKAEKASLSGTQTIKAELE QAKIAIEQARRNGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLL RMEEQLHDRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMIRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGELNYGSMKDLVLEVVSHNFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYKRLEERGYSVHISAEAL NLLSENGFDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKTIELVDKDGTIVATQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-159 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006318596.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 2e-108 | 42 |
