Gene Information

Name : EBL_c09420 (EBL_c09420)
Accession : YP_006318568.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Unknown
Product : putative phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 952807 - 953994 bp
Length : 1188 bp
Strand : -
Note : similar to prevent host death protein

DNA sequence :
GTGGCACGGACAACACGCCCCCTGACAAACACCGAAGTTCTGCGCGCAAAAGCGTTAGAGAAGGATCTAACGCTGCATGA
TGGCGATGGGCTTTTCCTTATAGTGAAAACCAGCGGGAAAAAGCTCTGGCGTTTCCGTTATCAACGCCCGGCAACAAAGC
AGCGAACAATGATGGGGCTCGGTGCCTTCCCTGCTCTTTCACTTGCTGATGCCCGAGGGTTAAGAACGGATTACCTTGCC
TTGTTAGCCAACGGAATCGACCCGCAGATTCAAGCTGAAGTTGCAGAGGAAGCGCAGCAAATCGCACTGGACAGTATTTT
TTCAACGGTCGCCGCTAACTGGTTCCAGCTCAAAAGCAAAAGCGTTACCCCTGATTACGCAAAAGACATTTGGCGCTCAC
TGGAGAAAGATGTATTCCCTGCCATCGGTGAGATCCCCGTTCAGCAAATCAAAGCCCGGACACTGGTTGAAGCTCTTGAG
CCAATAAAAGCACGTGGAGCACTTGAGACTGTGCGCCGGTTGGTGCAGCGCATCAACGAGATAATGATTTATGCCGTAAA
CACAGGTCTGATTGATGCGAATCCGGCTTCAGGTGTTGGCATGGCTTTTGAGAAGCCCAAAAAGCAAAGCATGCCGACGC
TGCGGCCAGAGGAATTACCAAAGCTGATGCGTTCGCTAATCATGTCAAATCTATCTGTTCCGACTCGCTGTCTTATTGAG
TGGCAGCTCCTGACCCTTGTGCGCCCTTCTGAGGCTTCCGGTGCTCGGTGGGCGGAGATCGATCTCGATGCAAAGCTCTG
GACTATTCCAGCCGAACGGATGAAGGCCAATCGAGAGCATGTTGTTCCCTTATCGCCTCAGGCATTAGAGATTCTGGAAG
TGATGAAGCCAATCAGCGCTCATCGTGAACATGTTTTTCCCAGCAGGAATGATCCCAAGCAGCCAATGAATAGTCAGACA
GCTAACGCCGCACTTAAGCGCATTGGATATGGTGGCAAACTTGTTGCTCATGGTCTGCGCTCTATTGCAAGTACAGCAAT
GAATGAAGCTGGTTTCAATGCAGATGTTATTGAGGCAGCACTAACCCATAGTGATAAAAATGAAGTTCGTCGAGCATATA
ATAGATCAACATACCTTGAAGCACGGAAAGAACTAATGGATTGGTGGGGTTTAGCCATATATAAATAA

Protein sequence :
MARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARGLRTDYLA
LLANGIDPQIQAEVAEEAQQIALDSIFSTVAANWFQLKSKSVTPDYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALE
PIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGVGMAFEKPKKQSMPTLRPEELPKLMRSLIMSNLSVPTRCLIE
WQLLTLVRPSEASGARWAEIDLDAKLWTIPAERMKANREHVVPLSPQALEILEVMKPISAHREHVFPSRNDPKQPMNSQT
ANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALTHSDKNEVRRAYNRSTYLEARKELMDWWGLAIYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 1e-101 53
int AAK20773.1 integrase Not tested VPI Protein 1e-101 53
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 1e-101 53
int AAK20803.1 integrase Not tested VPI Protein 1e-101 53
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-101 53
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 1e-101 52
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-87 48
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-87 48
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 7e-88 48
int AAD44730.1 Int Not tested SHI-2 Protein 1e-68 42
aec33 AAW51716.1 Int Not tested AGI-3 Protein 2e-67 41
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 1e-64 41
int CAC39282.1 integrase Not tested LPA Protein 3e-67 41
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 2e-67 41
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 1e-67 41
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 2e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c09420 YP_006318568.1 putative phage integrase VFG1092 Protein 7e-88 48
EBL_c09420 YP_006318568.1 putative phage integrase VFG0598 Protein 8e-68 41