Gene Information

Name : EBL_c06420 (EBL_c06420)
Accession : YP_006318278.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Unknown
Product : putative integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 660717 - 661379 bp
Length : 663 bp
Strand : -
Note : catalytic region

DNA sequence : 
GTGGCCACACTCTGCCACGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGGTGAAAAACCCCGAAAAGCCAGACGG
CAAGCGGGCTGTATTACGTAGTCAGGTTCTGGAGCTGCATAACATCAGTCATGGCTCTGCTGGTGCAAGAAGTATCGCCA
TTATGGCAACCCTGAGAGGCTTCAGAATGGGACGCTGGCTTGCCGGCAGGCTCATGAAAGAACTGGGGCTGGTGAGTTGT
CAGCAACCCACCCACCGGTATAAACGTGGTGGTCATGAACACATCGCTATCCCAAATCACCTTAAGCGACAGTTCGCAGT
GACAGAGCCTAATCAGGTGTGGTGCGGCGATGTGACGTATATCTGGACAGGCAGCCGCTGGGCTTACCTCGCCGTTGTTC
TCGATTTGTTCGCCAGGAAACCGGTAGGCTGGGCAATGTCATTCTCACCGGACAGCAGGTTAACCATCAAAGCACTGGAA
ATGGCGTGGGAAACCCGAGGTAAACCAGCGGGAGTGATGTTCCACAGTGACCAGGGTAGCCACTACACAAGCAGGCAGTT
CCGGCAGTTATTGTGGCGTTACCGGATCAGGCAAAGTATGAGTCGACGCGGAAACTGTTGGGATACTCATTCTAATATAC
TTTCAAATACCGGATCGGACTGA

Protein sequence : 
MATLCHVFGVHRSSYKYWVKNPEKPDGKRAVLRSQVLELHNISHGSAGARSIAIMATLRGFRMGRWLAGRLMKELGLVSC
QQPTHRYKRGGHEHIAIPNHLKRQFAVTEPNQVWCGDVTYIWTGSRWAYLAVVLDLFARKPVGWAMSFSPDSRLTIKALE
MAWETRGKPAGVMFHSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDTHSNILSNTGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-69 66
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 5e-69 66
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-69 66
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-69 66
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-69 66
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-69 66
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-69 66
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 5e-69 66
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 7e-48 54
tnpB CAB61574.1 transposase B Not tested HPI Protein 1e-26 42
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 7e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c06420 YP_006318278.1 putative integrase VFG1122 Protein 2e-69 66