Gene Information

Name : basR (EBL_c03960)
Accession : YP_006318035.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 405891 - 406547 bp
Length : 657 bp
Strand : -
Note : member of 2-component regulatory system

DNA sequence : 
ATGAAATTACTGATTATCGAAGATGATGCACTACTCCGGGAAGGACTGACCATCGCCCTGCGTAACGAAGGCTATGCGCT
TGACTGTGCCGATACTGCCGCCCGGGCAGACGGGTTAATCAGTACGGGCGAATACAGCCTGGTTATCCTCGACCTCGGCC
TGCCGGACAAAGACGGCGCCACGCTGCTCAGCGCCTGGCGCCGCAGCGGCATAAAAACCCCGGTACTGATCCTGACGGCC
CGCGACGGTCTGGAAGACCGGGTCAGGGGGCTGGACTCCGGCGCAGATGACTACCTGGTCAAACCCTTCGCGCTGGTCGA
GCTTCAGGCCCGGGTCCGGGCGCTGATTCGCCGCTACCAGGGGCAGAGCGATAATCAGATATCCCTTGATAACCTCACCC
TGAATCTGCAAACCCAGCAGGTTTACCTGGATGACAGCGAAATTGAGATAACCCCGAAAGAGTTTGCGCTGCTGTCGCGC
CTGCTGATGCGCGCCGGGCAGACCGTGCACCGGGAAACCCTGCAACAGGATCTCTACAGCTGGCAGGACGATCCCGGCTC
CAATACTCTGGAGGTCCATATTCACAACCTGCGCCGTAAACTGGGTAAAGAGCGGATCAAAACCATTCGCGGCGTCGGCT
ACCGGCTGGAGAAATAA

Protein sequence : 
MKLLIIEDDALLREGLTIALRNEGYALDCADTAARADGLISTGEYSLVILDLGLPDKDGATLLSAWRRSGIKTPVLILTA
RDGLEDRVRGLDSGADDYLVKPFALVELQARVRALIRRYQGQSDNQISLDNLTLNLQTQQVYLDDSEIEITPKEFALLSR
LLMRAGQTVHRETLQQDLYSWQDDPGSNTLEVHIHNLRRKLGKERIKTIRGVGYRLEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-36 44
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_006318035.1 transcriptional regulator BAC0487 Protein 7e-60 67
basR YP_006318035.1 transcriptional regulator CP001918.1.gene5135. Protein 1e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_006318035.1 transcriptional regulator VFG0473 Protein 1e-52 57
basR YP_006318035.1 transcriptional regulator VFG0596 Protein 9e-27 41