Gene Information

Name : kdsD (EBL_c03800)
Accession : YP_006318019.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 393015 - 394001 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence :
ATGTCCCATGTAGAATTACAGCCGGGTTTTGACTTTCAGCAGGCGGGTAAGGATGTCCTGAAAATTGAACGTGAAGGCCT
GGCCCAGCTTGATCAGTACATCAATGACGATTTTTCGCGCGCCTGCGAAACCATATTCCACTGCCCCGGCAAAGTCGTGG
TGATGGGGATGGGGAAATCCGGGCATATTGGCCGCAAAATGGCAGCCACCTTTGCCAGTACCGGCACCCCGGCGTTTTTT
GTACACCCGGGTGAAGCGGCCCACGGGGATCTCGGTATGGTCACCCCTCAGGATATCGTGATTGCCATTTCCAACTCGGG
CGAGTCGAACGAAATCCTGGCGCTGATCCCGGTACTCAAGCGCCTGCATGTGCCGCTGCTGTGTATGACTGGCCGCCCGG
AGAGCACCATGGCGAAAGCCGCAGATATCCACCTGTGCGTGACCGTGCCTCAGGAGGCCTGCCCGCTGGGACTGGCCCCG
ACCACCAGCACCACCGCGACCCTGGTCATGGGGGATGCCATGGCCGTGGCCCTGCTCCAGGCCCGTGGTTTTACCAAAGA
AGATTTTGCGCTGTCGCACCCCGGTGGTGCCCTGGGGCGCAAACTGCTGCTGCGGGTTAACGACATCATGCACACCGGTG
ATGAGATCCCCCACGTCAGCAAAGAGGCCTCCCTGCGCGATGCGCTGCTGGAGATCACCCGTAAAAACCTGGGCATGACC
GTTATCTGTGATGACCAGATGAACATCGACGGCATCTTTACCGACGGGGACTTACGCCGGATACTGGACGCAGGCATTGA
TCTGCATAATGCCAGAATTGTGGATGTCATGACCCCGGGGGGCATTCGCGTGCGCCCGGGTATACTGGCGGTTGATGCGC
TGAACCTCATGCAGTCGCGCCATATCACCTCCGTTATGGTGGCTGAAGGCGACCGGCTCATTGGTGTGCTCCATATGCAC
GATCTGCTGCGCGCAGGCGTGGTATAA

Protein sequence :
MSHVELQPGFDFQQAGKDVLKIEREGLAQLDQYINDDFSRACETIFHCPGKVVVMGMGKSGHIGRKMAATFASTGTPAFF
VHPGEAAHGDLGMVTPQDIVIAISNSGESNEILALIPVLKRLHVPLLCMTGRPESTMAKAADIHLCVTVPQEACPLGLAP
TTSTTATLVMGDAMAVALLQARGFTKEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMT
VICDDQMNIDGIFTDGDLRRILDAGIDLHNARIVDVMTPGGIRVRPGILAVDALNLMQSRHITSVMVAEGDRLIGVLHMH
DLLRAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-50 42
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-50 42
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 5e-50 42