Gene Information

Name : dnaB (EBL_c36630)
Accession : YP_006321225.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3785587 - 3787002 bp
Length : 1416 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGCAAAGAAACCCTTCAATAAACCTCAGACTGAGGCCGGCGAGCGCGATCCGCAACTGGCCGCCCTGAAAATGCC
CCCCCACTCGCTGGAGGCGGAGCAGTCGGTACTGGGCGGGTTAATGCTGGACAACGAACGCTGGGACGACGTGGCAGAAC
GCGTGGTGGCAGAGGATTTTTATACCCGCCCGCACCGCCATATCTTCACCGAGATGCACCGCCTTCAGGAGCTGGGCAAG
CCCATTGATCTGATAACCCTGTCAGAGTCTCTGGAGCGCCAGGGTCAGCTTGAGAGTGTGGGCGGTTTCGCCTATCTGGC
TGAGCTGTCGAAAAACACCCCCAGCGCGGCAAATATTAACGCCTATGCGGATATTGTCCGCGAGCGTGCCGTGGTGCGCG
AGATGATAGCCGTGGCGAACGAAATCGCCGACGCGGGGTTTGATCCCCAGGGGCGCACCAGTGAAGACTTGCTGGATCTG
GCCGAGTCCCGGGTGTTCCAGATTGCCGAAAACCGCGCCAGTAAAGACGAAGGCCCCCAGAGTATTGATAAAATTCTCGA
CGCGACCGTCGCCCGGATCGAAACCCTGTACCAGCAGCCCCACGACGGGGTTACCGGGGTGGATACCGGCTACCAGGATC
TGAACAAAAAGACCGCCGGGCTACAGGGGTCAGACTTAATTATCGTGGCGGCGCGCCCCTCAATGGGGAAAACCACCTTC
GCCATGAACCTGTGCGAAAACGCCGCCATGCTCCAGGACAAGCCGGTACTTATCTTCAGCCTTGAGATGCCCTCAGAACA
GATAATGATGCGTATGCTGGCCTCCCTCTCCCGGGTTGATCAGACCCGTATCCGTACCGGGCAACTGGATGATGAGGACT
GGGCGCGTATCTCCGGCACCATGGGAATACTGCTGGAGAAGAACAATATGTATATTGATGACTCTTCCGGCCTGACCCCG
ACCGAGGTGCGCTCCCGTGCCCGGCGCGTATTCCGCGAACGCGGCGGCCTGAGCCTGATAATGATCGACTACCTGCAACT
GATGCGGGTGCCCTCGTTGTCTGATAACCGTACCCTGGAAATTGCCGAAATCTCCCGCTCCCTGAAGGCGCTGGCAAAAG
AGCTGCAGGTGCCGGTGGTGGCCCTTTCTCAGCTGAACCGCTCCCTGGAGCAGCGTGCCGACAAACGCCCGGTCAACTCG
GATCTGCGTGAATCCGGCTCCATTGAACAGGATGCGGATCTGATTATGTTTATCTACCGTGATGAGGTGTATCACGAGAA
CAGCGACCTGAAAGGGATCGCTGAAATTATCATCGGTAAACAGCGTAACGGCCCCATTGGCACGGTACGGCTGACGTTTA
ACGGCCAGTGGTCCCGGTTTGACAATTACGCGGGCCCGCAATACGACGACGAATAA

Protein sequence :
MAAKKPFNKPQTEAGERDPQLAALKMPPHSLEAEQSVLGGLMLDNERWDDVAERVVAEDFYTRPHRHIFTEMHRLQELGK
PIDLITLSESLERQGQLESVGGFAYLAELSKNTPSAANINAYADIVRERAVVREMIAVANEIADAGFDPQGRTSEDLLDL
AESRVFQIAENRASKDEGPQSIDKILDATVARIETLYQQPHDGVTGVDTGYQDLNKKTAGLQGSDLIIVAARPSMGKTTF
AMNLCENAAMLQDKPVLIFSLEMPSEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISGTMGILLEKNNMYIDDSSGLTP
TEVRSRARRVFRERGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS
DLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-104 55
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 6e-102 54
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-101 54
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-101 54
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-93 51
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-87 50
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-87 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 8e-85 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-76 46