Gene Information

Name : EBL_c35080 (EBL_c35080)
Accession : YP_006321074.1
Strain : Escherichia blattae DSM 4481
Genome accession: NC_017910
Putative virulence/resistance : Virulence
Product : putative TRAP transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3629727 - 3631013 bp
Length : 1287 bp
Strand : -
Note : DctM subunit

DNA sequence :
ATGGATGCTTTTATTCTGTTGTTTACGCTGGCGATTATGCTGGCAATCGGCGTGCCGGTGGCCTATGCGGTAGGTATCAG
CGCCATTATCGGGGCCTGGTACATTGATATCCCGCTGGAAGCGCTGATGATCCAGCTGACCAGCGGGGTGAATAAGTTCT
CCCTGCTGGCGATTCCGTTCTTTATTCTGGCCGGGGCGATCATGGCCGAGGGGGGTATCGCCCGGCGGCTGGTCAACTTC
GCCTATATCTTTGTCGGGTTTATTCGCGGCGGCCTGTCGCTGGTGAACATTGTGGCTTCTACCTTCTTCGGGGCCATTTC
CGGCTCTTCGGTGGCGGATACCGCCTCCATTGGCTCGGTGATGATCCCGGAAATGGACAAAAAAGGCTATCCGCGCGACT
TCGCCGCAGCGGTGACCGCCAGCGGCTCGGTGCAGGCTATCCTCACACCCCCCAGTCATAACTCGGTGATTTACTCGCTG
GCAACCGGCGGCACCGTGTCGATTGCGGCGCTGTTTATTGCCGGGGTATTGCCGGGCCTGCTGATGAGCCTGACGCTAAT
GGCAACCTGCGTGGCCTTTGCCCATAAGCGCGGCTACCCGAAAGGGGAGCGGGTGCCCTTTCGCCAGGCGCTGAAGATCT
TTACCGACACCCTGTGGGGGCTGATGACGGTGGTGATCATTATGGGGGGGATCCTGTCGGGGATCTTTACCGCCACGGAA
TCTGCCGCCATCGCCTGCCTGTGGGCGTTCTTCGTGACGATGTTTATCTACAAAGACTATAAGTGGTCGGAATTGCCGAA
GCTGATGTACCGCACGGTAAAGACGGTAACCATCGTGATGATCCTGATTGGCTTTGCGGCGGCGTTCGGCGCCATCATGA
CCTATATGCAGCTGCCCGCGCGGATCACCGAGTTCTTCACCAGCATCTCGGATAATAAATATGTGATTCTGATGTGCATC
AACATCATGCTGCTGCTGATTGGCACCCTGATGGATATGGCCCCGCTGATCCTGATCCTGACGCCGGTTCTGCTGCCGGT
GGTTGTGGCGCTGGGGGTGGATCCGGTGCACTTCGGGATGATCATGCTGGTTAACCTCGGGATCGGGCTGATTACCCCGC
CGGTAGGATCAGTGCTGTTTGTGGCAAGTGCCGTGAGTAAGCAGCGCATTGAGCAGGTGGTGAAAGGGATGCTGCCGTTT
TACGGCATTCTGTTTCTGATCCTGATGCTGGTGACCTATGTCCCGGCCCTGTCTCTCTTTCTGCCGAAGCTGTTTGGTGT
GATGTAA

Protein sequence :
MDAFILLFTLAIMLAIGVPVAYAVGISAIIGAWYIDIPLEALMIQLTSGVNKFSLLAIPFFILAGAIMAEGGIARRLVNF
AYIFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIGSVMIPEMDKKGYPRDFAAAVTASGSVQAILTPPSHNSVIYSL
ATGGTVSIAALFIAGVLPGLLMSLTLMATCVAFAHKRGYPKGERVPFRQALKIFTDTLWGLMTVVIIMGGILSGIFTATE
SAAIACLWAFFVTMFIYKDYKWSELPKLMYRTVKTVTIVMILIGFAAAFGAIMTYMQLPARITEFFTSISDNKYVILMCI
NIMLLLIGTLMDMAPLILILTPVLLPVVVALGVDPVHFGMIMLVNLGIGLITPPVGSVLFVASAVSKQRIEQVVKGMLPF
YGILFLILMLVTYVPALSLFLPKLFGVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 7e-48 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 7e-48 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 5e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EBL_c35080 YP_006321074.1 putative TRAP transporter VFG1110 Protein 3e-48 41